Trematomus bernacchii (emerald rockcod): 117473537
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Entry
117473537 CDS
T09643
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117473537 (nlrc3)
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117473537 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
117473537
NCBI-ProteinID:
XP_033975041
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MERRAHYDSILDRSKRITWQDDCYVDLQSTPCSVSSKAETEELGWIQKHQDQLQRFITTS
FLEDMMTHLRKMDVLSSAEETKVKEAGRLQEQVNMFTAIVSGKDSQGSDALRAFVQSSDS
QVAQLIINHESMVKEHKEALLRRYEQYRDRDSIICPKLNISSRTLLLVDGLSDIQQKEHD
LMQVGATRGRKRNHLRQLGLTKLLEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFIRQWSQ
GAICTDVSFVLPFTFCELNSLEKVSAERLVKMAFPHLTDPGLVLSSSCRTLLILDGLDEF
RCTLNFSDAAPCSDPKKEVSIDDLVTNILRGNLLPDVAVWVTSRPGVASLIPGGLVDRVT
EIPGFSSKDIQLFLNHHFSERDFSSKIWAHLESNKILMVMCYIPCISWIVADTLMYIMQS
ETQESLPRTCTELYAHFCSMKAEVGEPRGREPVKMEQVHGTNRKLLGNLGRLAFYGLLKH
KYTFSEQDLRAYGIDLLLTQCSLGAGVLVREESTLSTTYRFTHLTLQEFLAATFYHISSK
RALFDLFSESTMSWPKIGFQNHFKSAFQHSQQAEDGHLDVFVRFLTGLLCPAAIKPLAGL
LALGKDDGNQKAWAAGFLQGLLVSGGSVVSLRSVNLAYCLQELQHTELLRSVEEDLQLGS
LAGKLTRTHCVVLGYLLHVSAECSEQTNLTGSLNYATVKCLLPQLLYCSFLRLENNHFKD
DVMELLGSLLSAKDCHIQKISLAENAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNSIEEEGAQALAEVLHCNRKLVSLNLRKNMVGAGGAKRIA
EALKTNRTLTKLILCSNQLGDKGTVALAEALTVNHTLLSLQLQSNSISNKGMTALTKALR
LNRGLVSLNLRENSIGVEGAKNMAQALHENNSLQDLDLTANLLHDEGVQAIAGAIKVNRG
LTSLHLQWNFIKCSATKALANALLTNATIQLLDLQENAIGNEGVVFLAEALKTNMSLRTL
CLQGVSASTSGALAMAEALMRNQTLQTLDLRGNSVGMEGAKALANALKSNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNSIGESGAKVISDAIRANAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggcccactacgattctatcctggatcgaagcaaacgcatcacgtggcag
gacgactgctacgtggaccttcagtcgacaccctgctccgtctcttcaaaagcagaaaca
gaggaacttggctggatccaaaagcaccaagaccagctgcaacgcttcatcacaacctcc
ttcctggaggacatgatgacacacctgagaaagatggatgtgttgagttcagctgaagag
acgaaggtcaaggaggcgggccggctgcaggaacaggtcaacatgttcacagccatcgtc
tctggcaaggactctcaagggtctgacgctctgcgggccttcgttcagagctcagactct
caggtggcccagctcatcatcaaccacgaatccatggtgaaggagcacaaagaggcactc
ctccgacgatacgagcagtacagagaccgagattcaatcatctgccccaaactgaacatc
tcctccaggacattacttctggttgatggactttccgacatacagcagaaagaacacgac
ttaatgcaggtcggggcgactcgaggaaggaagagaaatcatctcagacagcttgggctg
accaaactcttggagcctttgacccgggttagtttacccccgcgggtctccctcacagtc
ggggtggctggtatcggcaagacaacctgggtccgacacttcatccgacagtggagccaa
ggagccatctgcaccgatgtgagctttgtcttgcctttcactttttgcgagctgaactcc
ctggagaaagtctctgctgagaggctggttaaaatggcttttcctcatctaacggacccc
ggtctggtcctgagcagctcctgccgcacactgctcattctcgatggtttggacgaattt
cgctgcaccttaaatttctccgatgcagctccttgcagcgacccaaagaaagaggtgtcc
atcgatgacctggtgactaacatcctccgggggaatcttctccctgacgtagcggtgtgg
gtgacctccaggcccggggtggcctcactaatccccggaggattggttgacagggtgact
gaaatcccaggattcagctcaaaggacatccagctcttcctaaaccaccacttctccgag
agggatttttccagtaagatctgggcgcacttggagtccaataagatcctaatggtgatg
tgctacataccttgcatttcgtggatagtagcagacactctgatgtacatcatgcagagt
gaaacacaggaaagcctccccaggacgtgtaccgaactctacgctcacttttgttctatg
aaggcagaagtaggtgaaccaaggggccgggagcctgtgaaaatggagcaggttcacggg
actaatcgcaaactgctgggaaaccttgggcgtctggcgttttatgggctcctcaaacac
aagtacaccttcagcgagcaggacctccgggcctatgggatagacctgctgttgacccag
tgcagtctgggggctggagttcttgttcgggaggagtcgaccttgtccacgacataccgc
ttcactcatttgactctgcaggagtttcttgcagctaccttctaccacatctcctccaag
cgggcactctttgacttattctcagagagcaccatgtcttggcccaagatcggtttccag
aaccacttcaaaagcgccttccagcactcgcagcaggcggaggacggtcacctggacgtg
tttgtgcgcttcctgacaggcctgctgtgtccggcggcaataaagcctctcgctgggctg
ctggccctcgggaaggacgatgggaaccagaaggcgtgggcagcggggtttctacagggt
ctgttggtcagtggagggtcggtggtgtccctgcggtcggtcaacctggcttattgttta
caggagctgcagcacacagagctgctgcggagcgtggaggaagacttgcagctgggcagc
ctggcagggaagctaactcgcactcactgtgtggtgctgggctacctgctgcatgtgtcg
gcagagtgcagcgagcagaccaacctcaccggctccctgaactacgccacggtcaaatgt
ttgctcccacagctgctgtactgcagctttctcaggttggagaacaatcactttaaagat
gatgtcatggagctgctgggaagcctcctaagtgctaaagactgccatattcagaaaata
agtttggcagagaatgccatcagcaacaaaggtgccaaagctctgagtcgagcgctcttg
gtgaaccggacgctaacgtctctcaatctccggaacaacaacattggctctaaaggcgcg
aagttccttgcagaggctctaaaaatgaaccaagtcctggtatcaatcaacttccagaac
aattccattgaagaggaaggtgctcaggctctcgcagaagtgctgcactgcaaccgcaaa
ctggtgtctctgaacttacggaagaacatggttggagctggaggagccaaaaggattgca
gaggcgctgaagacaaaccggaccctcacaaaactgattctttgtagtaaccagctcggg
gacaaaggaacagtggctctggccgaggctctgacagtgaaccacacgctgctgtcgctg
caacttcagagtaactccatcagcaacaaggggatgacggcgttaaccaaagcgctccgg
ctgaaccgtggtctggtctccttgaatttgagggagaactccattggggtcgagggggcg
aagaacatggcccaggccctccatgagaacaactcgcttcaggacctcgatctcacagcc
aacctcctgcacgatgaaggggttcaagctatagctggcgcgatcaaagtgaatcgaggc
ctcacctctctgcatctccagtggaatttcatcaagtgctctgccactaaagctctggcc
aacgctctcctcactaatgccacaattcagctcttggatctacaggagaatgctatcggg
aatgaaggcgtcgtctttcttgccgaagccttgaaaaccaacatgtctctgcgtacattg
tgtctccagggagtctcagcgagcacaagtggcgccctggcaatggcggaggctctaatg
agaaaccaaactctgcaaacactggatctgcgagggaacagcgtggggatggagggagcg
aaggctctggccaacgcactgaaaagcaacagaagcctcaagtctttgaatctgcaggag
aactctctgggtatggatggagccatattcattgcaacagccttgaaaggaaaccaccaa
ttgacatacatcaatctgcaggggaatagcattggggaatcgggagcaaaggtcatctca
gacgccatacgagccaacgcaccgggctgtgtggtcgacatctga
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