Trematomus bernacchii (emerald rockcod): 117473558
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Entry
117473558 CDS
T09643
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117473558 (fbxo11b)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117473558 (fbxo11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
117473558
NCBI-ProteinID:
XP_033975078
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVQPERNNGDRDEEAPAAAAAEMAIEESGPGAQNSPYQLRRK
TLLPKRTAAASATASACPSKGPMEGASTSSTEAFGHRAKRARVSGKSHDLPAAPAEQYLQ
QKLPDEVVLKIFSYLLEQDLCQAACVCKRFSQLANDPILWKRLYMEVFEYTRPMMHPEPG
KFYQVSPEEHEHPNPWKESFQQLYKGAHVKPGFAEHFYSNPGRYKGRENMLYYDTIEDAL
GGVQEAHFDGLIFVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGS
EDAYVGYMTIKFNPDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGA
CPTIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRD
VGVFTFDHGMGYFENCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFI
ENKIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIESNDIYGNALAGIQI
RTNSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRKNRIH
SGKQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGL
GFIEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQA
GVLISTNSHPILRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKD
NKILNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGH
DVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagccaccaacaggagacccaggcgagtgtcgaggccgcgcccggtg
cagcccgaacggaacaacggggatagagatgaggaggctcctgcagcagctgcagcagaa
atggctattgaggagtccggcccaggagctcagaacagtccctaccagcttcgacgcaaa
accctgcttcccaagagaaccgctgctgcctctgccaccgcctctgcctgcccgagcaag
ggcccaatggagggagcttccacttcatcaacagaggcctttggccatcgagccaagcgg
gcacgagtgtccggtaagagccacgacctgccagcagccccagcagagcaatatctgcaa
cagaagcttccagatgaggttgttttgaagatcttctcctacctactggaacaggacctc
tgtcaggcagcttgtgtctgcaagagattcagccagctagccaacgaccccatcctatgg
aagcgtctatacatggaggtatttgagtacacgcgtcccatgatgcatcctgagccaggc
aagttctaccaagtcagcccagaggagcatgaacacccaaacccctggaaggaaagcttc
caacaactgtacaaaggagcgcatgtaaagccaggcttcgctgagcatttctacagtaac
cccggcaggtacaaaggcagagagaatatgttgtattatgacaccattgaggacgcgctg
ggtggagtacaagaggcccactttgacggtctaatctttgtccactctggcatctataca
gacgagtggatttatatagagtcccccatcaccatgattggtgcagctcccggtaaagta
gcagacaaggtggtgatagagaatactagagactcaacgtttgtcttcatggagggctcg
gaggatgcctatgtgggatacatgactatcaagtttaatcctgatgataagtcagcgcag
caccataacgcccaccactgtctggagatcacggtcaactgcagccccaacatcgaccat
tgcatcatccgctccacgtgcacagtgggttcagctgtgtgtgtgagtggccaaggagcg
tgtccaaccatcaaacactgcaacatcagtgactgtgaaaacgtaggactgtacatcaca
gatcatgcacagggcatttatgaagacaatgaaatcagcaacaatgcgctagcaggaatt
tgggtgaaaaaccacggtaatcccatcattagacgtaaccacatccaccacgggcgagat
gtgggggtgttcaccttcgaccacggcatgggttactttgagaactgtaacattcataga
aaccgcatagcaggcttcgaggtaaaggcctacgccaaccccacggtggtgcgctgcgag
atccatcacggccaaacggggggcatttacgtccacgagaaggggcgggggcagtttata
gagaacaaaatctacgccaataacttcgccggtgtgtggatcacgtccaacagcgaccca
acgatacggggaaatgctatattcaacggtaaccaaggaggggtgtacatatttggagat
ggacggggtttgatagagagtaacgatatctatggtaacgccttggcgggaatccagatc
cgaaccaacagctgccccattgtacggcacaacaagatccacgatggacagcatgggggc
atctatgtgcatgagaaaggccagggggtgatcgaggagaacgaggtttacagcaacacc
ctggctggagtgtgggtgaccacgggcagcacgccggtcctccgcaagaaccgcatccac
agcggcaagcaggttggcgtatatttctatgacaacgggcacggtgtgttggaagacaat
gacatctacaatcacatgtactctggtgtacaaataaggaccggtagcaacccaaagatc
aggcgcaacaagatatggggggggcagaacggagggattttagtttacaactcaggtctg
ggcttcatcgaggacaatgagatctttgataatgccatggcgggggtgtggatcaagact
gacagcaaccccacgctgagacgaaacaagattcatgacggcagagatggaggcatctgc
atcttcaacggaggcagaggtctgttggaagaaaacgacattttcagaaacgcgcaggcc
ggagtgctgatcagcaccaacagccacccgatactccgcaagaaccgcatttttgacggc
ttcgctgcaggtattgaaatcactaaccacgccacagccacactggagggcaaccagatc
ttcaacaatcgcttcggaggcctgtttctggcctcgggggtcaacgtcaccatgaaagat
aataagattctgaataaccaggatgccattgagaaagcagtgagcagagggcagtgcctc
tacaagatttccagctacaccagctaccccatgcacgacttctacagatgtcacacctgt
aatacaacagataggaacgccatctgtgttaactgcatcaaaaaatgccaccaagggcac
gatgtagaatttatacggcacgatcggtttttctgtgactgcggagcgggaacgttgtcc
aacccctgcacgctggcgggagagcccacgcacgacacggacactctgtacgactcggcg
ccgcccatcgagtccaacacgctgcaacataactga
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