Trematomus bernacchii (emerald rockcod): 117473611
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Entry
117473611 CDS
T09643
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04517
IgSF CAM signaling
tben04518
Integrin signaling
tben04519
Cadherin signaling
tben04520
Adherens junction
tben04810
Regulation of actin cytoskeleton
tben04820
Cytoskeleton in muscle cells
tben05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117473611
04518 Integrin signaling
117473611
04519 Cadherin signaling
117473611
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117473611
04520 Adherens junction
117473611
09142 Cell motility
04820 Cytoskeleton in muscle cells
117473611
04810 Regulation of actin cytoskeleton
117473611
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117473611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117473611
04147 Exosome [BR:
tben04147
]
117473611
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117473611
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117473611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
117473611
NCBI-ProteinID:
XP_033975173
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGRE
TVQTTEDQIMKRDMPPAFSKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGGQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKIAQAKNWLRDPNAQSGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSDIRARGQGASPAAMQKAQQVSQGL
DVLTGKVENAARKLEAMTNSKQAIAKRIDAAQSWLADPNGGPEGEENIRALLTEAKRIAD
MCEDPKEREDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALSKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIENPTIDDSGVGQAAIRGLVAEGRRLANALQGPYRQE
LLGKCELVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDAPNRDEVFDERAANFQNHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEDAIKKDLEKCRLAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EMVKAASDELSQTISPMVMDAKAVAGNIKDPSLQKGFLDSGYNILGAVAKVREAFLPQEP
DFPPPPPELDQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQTGDMVNEPMMVA
ARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGFALHWIRKTPWYQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacgaagacgatagaaagtatcctggagccagtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaagttgacgggaaagctataccagatctg
acggcgccggtggctgccgttcaggcggccgtcagcaaccttgttcgggtggggagggag
actgtacaaactacagaggaccagatcatgaaaagggacatgccaccagcttttagcaaa
gtggagactgcatgcactaaactggtgcaggctgcctccatgctgaaagctgatccgtac
tccgtccctgctcgggattacctcatcgatggctcgcggggcatcctctctgggacctct
gacctgctcctgacctttgacgaagctgaggtccgcaaaataatccgtgtgtgcaaaggc
atcctggagtacctgacggtggccgaggtggtggagtccatggaggacctgatcacgtac
acaaagaacctgggtccaggaatgacaaagatggcgaagatgatcgatgagcgacagcag
gagctgactcaccaggagcaccgcgtgatgttggtgaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtatcaaaatctttgtgacaaccaagacgtctggcggc
cagggtgtggaggagtccttgaagaatcgtaacttcacttttgagaagatgagcgcggag
ataaatgagatcatcagagtgctgcagctgacgtcctgggacgaggatgcctgggccaat
aaggacacagaggccatgaagagggctctggggcttatcgactcaaagatagctcaagct
aagaactggctgagagatccaaacgctcaatcaggggacgcaggcgagcaggccatccgc
cagatccttgatgaagccgggaaagttggtgaactgtgtgctgggaaggaacgcagagat
atcctgggcactgccaagactctgggccagatgactgaccaggtgtctgatatcagggcc
agaggtcagggggcgtccccggccgccatgcagaaggcacagcaggtttcccaggggctc
gacgtgctaactggcaaggtggaaaatgctgctcgcaagctggaggccatgactaactcc
aagcaggccatcgccaaaaggattgatgctgcccagagctggctggcagaccctaacggc
ggcccagagggagaagagaacatcagggccctgctcaccgaggccaaaaggattgcagac
atgtgtgaggatcccaaagaaagagaggacatcttgcgctctattggagagatcgctgcc
atgactgccaagttgtctgatctcaggagacagggtaaaggtgacactcccgaggccaga
gctttgtctaaacagatcgcaacagctctgcagaacctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgcgaaggcagctgttcacttggaaggaaaaatcgagcaggcg
cagcgctggattgaaaatcccaccatagatgacagcggtgtgggtcaggcagccatccgc
gggctggtggcagagggccgcaggctggccaacgctctgcagggcccctacaggcaggag
ctgctgggtaagtgtgagctggtggagcagctcatggcccagctggccgacctggctgcc
cgcggggaaggggactctcctcaggcacgggctgttgctcagcagctccaggaggctctg
aaagacctgaaagggaagatgcaggaggcgatgactcaggaggtgtctgacatcttcagt
gacaccaccacccccatcaagctgctggcagtggctgccaccgcccccctggacgcaccc
aacagagatgaggtctttgacgaaagagctgccaacttccagaaccacgccaataagctt
ggcaccacagcagagaaagctgctgctgtcggcactgccaacaaaagcacagtggaggga
atccaggctgctgtcaagtcaacaagagacttaacaccacaagtggtatctgcggctcgt
attctgctgagaaaccctggcaaccaagcggcatacgaacattttgaaaccatgaagaat
cagtggatcgacaacgtggagaaaatgacaggtctggtggacgaggccatcgataccaaa
tccttgctggatgcctcagaggacgccatcaagaaggacctggagaagtgccgtttggcc
atggccaaccaccagcctcagatgctggtcgccggcgccaccagcatcgcccgcagagcc
aaccgtatcctcctggtggcgaagcgagaggtggagaactctgaggatcctaaattcagg
gagatggtgaaggctgcgtctgacgaactgagccagacaatttctcctatggtgatggat
gctaaagcagtggctggaaatatcaaggatccaagtcttcagaaaggctttctggactca
ggttataatattcttggtgccgtggcaaaggtcagagaggccttcctgccccaggagcca
gacttcccaccaccacctcctgaactggatcagcttaatcttaacgatgaggcagcacca
ccaaaacctcctcttcccgagggtgaggttcctccccccaggcctcctcccccagaggag
aaagatgaggagttccccgagcagactggtgatatggtgaacgagcccatgatggtggct
gccaggcagctccacgatgaagctcgcaaatggtccagcaaaggaaacgacatcattggt
gctgcaaaacgaatggccttgctcatggctgaaatgtctcgtctggtgcgcggaggcggc
ggaaacaagcgcgccctcatccagtgcgccaaggacatcgctaaggcttctgatgaagtc
acacggctggccaaggaggtggccaagcagtgtactgacaagcgtatccggaccaacctg
ctccaggtgtgtgagcgcattcccaccatcagcactcagctcaaaatcctctccacagtc
aaggccaccatgttgggtcgtaccaacatcagtgaagaggagtcagagcaggctactgag
atgttggtccacaatgctcagaacctgatgcagtccgtgaaggagacggtcagagaggcc
gaggcagcttccattaagatccggacggacgcaggttttgcccttcactggatcagaaag
accccctggtaccaataa
DBGET
integrated database retrieval system
