KEGG   Trematomus bernacchii (emerald rockcod): 117473615
Entry
117473615         CDS       T09643                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117473615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117473615
   03400 DNA repair and recombination proteins [BR:tben03400]
    117473615
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     117473615
   Cul5 complex
     117473615
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117473615
SSDB
Motif
Pfam: ubiquitin Rad60-SLD LED_rpt
Other DBs
NCBI-GeneID: 117473615
NCBI-ProteinID: XP_033975178
LinkDB
Position
Unknown
AA seq 119 aa
MDVFLMIRRQKTTIFTDAKESTTVYELKRIVEGILKRPPEDQRLYKDDQSLEDSKTLGDC
GFTNQTARPQAPATVGLAFRINDEMFEQLHVEAFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgtttttaatgatccggcgtcaaaagaccacaatcttcaccgatgccaaggag
tccaccactgtgtatgagctgaagcgtattgttgaaggaattcttaagagaccaccagag
gaccagaggctgtataaagatgatcagtcgctagaggacagtaaaactcttggtgactgt
ggattcaccaaccagactgccagacctcaagccccagctacagttggtctggccttccgc
ataaatgatgagatgttcgagcagctgcacgtcgaggccttctccagccccccagaactc
cctgatgtgatgaagccccaggattccggtagcacggccaacgaacaggcggtgcagtga

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