Trematomus bernacchii (emerald rockcod): 117473628
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Entry
117473628 CDS
T09643
Name
(RefSeq) syntaxin-4-like isoform X1
KO
K13502
syntaxin 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117473628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473628
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117473628
Membrane trafficking [BR:
tben04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117473628
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117473628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Mod_r
DUF6584
STX6_10_61_N
Syntaxin-18_N
Lzipper-MIP1
L27_2
DUF6548
DUF3671
NBAS_11th
BLOC1_2
Med9
Lectin_N
Motif
Other DBs
NCBI-GeneID:
117473628
NCBI-ProteinID:
XP_033975194
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MRDRTKELGNKAEASDEDEEAKALVIKPGTSSAKEEKENDAFFKKVQEIHEGLNSLKQMV
SNLENKQKALLADPLSDDSMKRELQTLREEIKTLAGHIQRKLKSIEPKKGEEDGKYVPIN
SRMQRTQHGVLSREFVEQMGYCNTIQAQYRDRNVERIHRQLKITGQDMTEEKLDAMLESG
QTNVFTQNILSDAIATKQALNEIESRHDEILKLEQSIRELHDMFQYLAMEVEAQGEMVNR
VENNIKQSTDYVVRAKENTEKAVTYQQKSRKKKLWIAICLAILILILVISLVSAFGT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccggactaaagagttaggaaataaggcagaggcttcagatgaggacgaggag
gcaaaagctcttgtgatcaaacctggaacctcttcagccaaagaggagaaggagaacgat
gcattctttaaaaaggttcaagaaattcacgaggggctgaacagcctcaaacagatggtg
tctaacctggagaacaaacagaaagctctgctggccgacccgctgtcggacgacagtatg
aagagagagctgcagactcttcgagaggagatcaaaacgttggcgggtcacattcagaga
aaactgaagagtattgaaccgaagaaaggagaggaggatggaaaatatgtacccataaac
tcccggatgcaacggacccagcacggagtcctgtccagggagtttgtggagcagatgggt
tactgtaacaccatccaggcgcagtacagggaccgcaacgtggagaggatacaccggcag
ctgaaaatcactgggcaggacatgacagaagaaaagctggacgcgatgctcgagagcggg
cagacgaatgttttcactcaaaatatcctgagcgatgctatagccacgaaacaggctctg
aatgagatcgagtcccggcacgacgagatcctgaagctggagcagagcatcagagagctg
cacgacatgttccagtacctggccatggaggtggaggctcagggggagatggtgaaccgg
gttgagaacaacattaaacagtcgacggactacgtggtgagagccaaggaaaacacggag
aaagcagtcacatatcagcagaaatcacgcaagaaaaagctctggatagcgatctgtttg
gctatcctcatcctcatcctagtcatctcattggtctccgccttcggcacctaa
DBGET
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