Trematomus bernacchii (emerald rockcod): 117473655
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Entry
117473655 CDS
T09643
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117473655 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473655 (rab11fip3)
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117473655 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
ZapB
Phage_Arf
Motif
Other DBs
NCBI-GeneID:
117473655
NCBI-ProteinID:
XP_033975244
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MEATVLSGPLGHTQWESELPFPLGFHSLESDNGGVLCQNKGGQTGLDFLNGDQTSQQSEE
EHIYQDKPAGLDNLINISAFSCGDLQFEGDQSNISKASLHGSCIEELSFTEKTEPPDELS
DYTLSWLFSPKLTDVVGKNTAHEELTLTQEAPLESSNSLSSEAGLISLSVPGSPSRISNT
GDPFLLVDLLSYENSCPPAESSGELNPQGVSEDDLSQEEQAGLPPSPSRETLSPETGDKS
LFPDQVTDLPVTCSIGALENCLPHDHVNSTPLESLEGSLPLLDSEVPDCDGSLSLCPASP
ASVICTGAPLDLSTEESEVEHAGATVNRNVTSDQEGENDSFALGLSAEPPSLTVPAAEDA
FIQGESTSESCHVENESKDLMDENICSEAKNQGNEAMALDLCLTAEEVHDEDIWDLKPQE
DVQIGSISDTTTKEKEEEMFTDNNQLEGSDCHDMASFDFSVQDLHNSSPEAGWTSEQTVE
TLSLSKMVGGDSLPMVSAESTREEDVSPLKAVFDALDQDGDGFVRIEEFMEFAAAYGADQ
VKDLTKFLDPSGLGVISFEDFHRGITAISNGGPEPQIYNYSPGDGAVGCQEEYDEQNEVT
DSAYLGSESTYSECETFTDEDTGALVPPEMHEEVETDSGIEATLHDPEDSGNRFSLNSEL
HNHSLVSVIGGEEEHFEDFGESNTSELLESSVEGREGEGVSPLEKTPSQNNGSSLLSPSA
GKRLSSKKVARHLLQNSSMTLDTVSDLTRDILELADNDITDKVLLLERRVAELEKESEAS
GEQHTRLRQENLHLVHRANALEEQLKEQEVYADEQVQQETRRHKEALIKLERERGVELEN
LQARLQQLDEENSELRSCVPCLRANIERLEEEKRKLQDESEALCDRLQEETESRRKMADK
LSHERHQSQKEKENTQELIEDLRKQLEHLQLYKLEAEAKRGRTPGAGLQEYQTRTREAEL
EQEIKRLKQDNRSLKEQNDELNGQIINLSIQGAKNLMSASFSDSLAAEINNVSRVELMEA
VHKQEEINYRLQDYIDKIIVAIMECNPSILEVK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgacagtcctgtctggccctttggggcacacacagtgggagtcagaactgcca
tttcctctcggatttcactctctggaatcagacaatggaggtgtgctctgtcaaaacaag
ggtggccagacaggtttggatttcttaaacggcgatcaaacatcacaacaaagtgaagaa
gaacacatttaccaggacaagccggcagggttggacaacctcataaatatctctgctttt
tcctgtggagatttgcagtttgagggagatcagtccaatatttccaaagcttctctccat
ggttcttgtatagaggaattgtccttcacagaaaaaactgagccacctgatgaactaagt
gactacactttgtcatggttattttctcctaaactcactgatgtggttggaaaaaacaca
gcccatgaggaattgactttgacgcaggaagcccctcttgagagctcaaattcccttagt
agtgaagctgggctaataagtctcagtgtaccgggctctccatcgagaatttccaacaca
ggagatccatttttgttggtagatctcctctcatatgaaaactcttgtccccctgcagag
tcctcgggtgagttgaacccacagggtgtcagtgaggacgacctgtcacaggaggagcag
gcaggactccctccctcaccgagcagggagactttgtcacctgaaaccggagacaaaagt
ttattccctgatcaagtgactgatctacctgttacctgcagcataggtgcacttgagaac
tgcctcccacatgaccacgtcaacagcacaccgctggagagtttggaaggatctctgcct
ttgttggattcagaggttccagattgtgacggcagtctcagcctgtgccccgccagtcct
gcctctgttatctgcacaggtgcgccattagatttatcaacagaggagtcggaggtggaa
catgcaggagctaccgtaaatagaaatgtgacttcagaccaagaaggtgagaatgactca
tttgctctgggtctgtcggctgaacctccgtcactgacggtgcctgcggctgaagatgcc
ttcatccagggtgaatccaccagtgagagctgccatgtggaaaatgaatcgaaggattta
atggatgagaatatttgttctgaagccaaaaatcaggggaacgaggcaatggctttggat
ctgtgcctgactgctgaggaggtccacgacgaagacatttgggacttgaaacctcaggag
gatgtacaaattggaagtatttccgatacaacaactaaagagaaggaagaggagatgttt
acggacaataaccagcttgaaggatcagattgtcacgacatggcttcttttgatttttca
gttcaggacttacacaattcttctcctgaggcaggatggactagtgagcaaactgtggag
acattatctctctctaagatggtgggaggtgactcactgccaatggtctcagctgagagt
acgagggaggaagatgtctccccactaaaagctgtgttcgatgctttagaccaagatggc
gatggatttgttcgtattgaggagtttatggagtttgctgctgcctatggggccgatcag
gtgaaggatctgaccaagtttctggatcccagtggtctgggagtgatcagctttgaagac
ttccaccggggaatcactgcaatcagcaatggaggtccggagccacagatctacaactac
agtccgggcgacggagcggtgggctgtcaggaggaatacgacgagcaaaatgaggtgacg
gacagtgcgtacctgggctccgagagcacttacagcgagtgtgagaccttcaccgatgag
gacacgggggccctggtgccccccgagatgcacgaggaagtggagacggacagcggcatc
gaggccacgctgcacgacccggaagatagtggaaataggttctccctgaactcggagctg
cacaaccattcgctggtgtctgtcatcgggggagaggaggagcacttcgaggactttggg
gaaagtaacacctcggagttactggagagcagcgtggaggggagggagggggagggagtc
tcccctctcgagaagacaccttcacagaacaatggctcctcactgctctctcccagcgct
ggcaagaggctgtccagcaagaaagtagcaagacatctcctccaaaacagctcgatgact
ctggacactgtgagcgacctgacgcgggacatcctggagctcgcagataacgacatcaca
gacaaggtgttgctcctggagcgtcgagtggcggagctggagaaggagtcggaggcttcg
ggggagcagcacactcggctgcggcaggagaacctccacctcgtgcaccgggccaacgct
ttggaggagcagctgaaggagcaggaggtctacgcggacgagcaggttcagcaggagacc
cggcgccacaaggaggcgctgatcaagctggagagggagagaggagtggagctggagaac
ctgcaggccaggctgcagcagctggacgaggagaacagcgagctgaggtcgtgcgttccc
tgtctcagagcgaacatcgagagactagaggaggagaagaggaagctgcaggatgagtca
gaggcgctgtgcgaccgtctgcaggaggagacggagtcccggaggaagatggccgacaag
ctgagccacgagcgccaccagagccagaaagagaaggagaacacgcaggagctgattgag
gacttgcgtaagcagctggagcatctacagctctacaagctggaggccgaagcaaagaga
ggacgcacacccggggccgggctgcaggagtaccagacccgcacccgagaggccgagctg
gagcaggagatcaaacgactcaaacaggacaaccgcagcctgaaggagcagaacgacgag
ctgaacggacagatcatcaacctcagcatccagggagccaagaacttgatgtcggcgtct
ttctccgactcgctggcagctgagatcaacaacgtgtcccgtgtagagttgatggaggcg
gtccacaaacaggaagagatcaactacagactccaggactacattgacaaaatcatcgtg
gccatcatggagtgcaacccctccatcctcgaggtcaaatag
DBGET
integrated database retrieval system
