Trematomus bernacchii (emerald rockcod): 117473711
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Entry
117473711 CDS
T09643
Name
(RefSeq) PH and SEC7 domain-containing protein 1-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117473711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473711
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117473711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
PH_9
PH
CCD97-like_C
NOA36
CDC45
Motif
Other DBs
NCBI-GeneID:
117473711
NCBI-ProteinID:
XP_033975365
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MPSPVAGLGCIDDQTPDCPSGHHRRPLSPTAQQKRAEQRRREILLLGPVALDSPEEDEGC
DEEGQGNEMEGFEAEQQGVGEAPEAEQNGAMGGSSSRSSSGVTGSLGDRDCVSPESSQSS
HQSNETGAATSGIQTDSGCALPVPSLHCQRIARAKWEFLFGTPAEEAASRGEKNSLEAST
APPSGNSSESPTPTPPFSLPLLSANHNVQQVEVELVTPPPAVIGTSPKTGIIRRTLKYSE
TDLDAVPLRCYRETDIDEVLLAELDDADSAFGSNRSVQGTSGTGSSPLGGLAYGRTDGEV
TEKRRGEGEEEEEEEEEEEEEEEEEEEEEEEEDEEEMVSWASVRMQGDNRKQQHAAQEDP
EVFGHLMKRPMATFFDNHHPALKSPILVSGPRCAAEDTFSRHFESIMESHRAKGTSYNSL
DSEELLTSSTQTVLTFDLPTLTPAIHGPVCQSTRQIVQLSFAPLAHDERPSISDSIFTMT
GDSDATRAPSSERLSSGSDDTPPKGRGYSQLGSSWYSNPSFSLPSRDKARLATDSELDQD
LSERLGLGSSETLTNGSHRADVAAARRLAKRLFNLDGFRKSDVARHLSKNNDFSRMVAEE
YLSFFDFAGLAIDQALRTFLRQFALMGETQERERVLAHFSKRYLDCNPKVIPSEDAVHTL
TCAVMLLNTDLHGQNIGKRMSCTQFISNLEGLNDGQDFHKDLLKALYNSIKNQKLQWTLD
EEELRKSFSELGDSLCDSTASRSLKAEGSSGKPPTEEAHPSGSLLYKNGFLVRKVHADSD
GKRTPRGKRGWKTFYIILKGLILYLQKGEYRPDKQLSEEDLKNAVSIHHSLAMKASDYSK
RPNVFYLRTADWRVYLFQAPNAEQMQSWITRINTVATMFSAPPFPAAIGSQKKFSRPLLP
GTMSKLSEEEQVRSHENRFRALSTELTELRSYPPDRKVKGRELEEYRQRDEYLEFEKTRY
GTYVMLLRAKIRSGEEDLSLFESQLLEDNSLQRAHSSPTLQDSSQASQVSKASSARDGGN
SSRASGCSGKLRQDGQRHSYRQAVKK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgccgagccctgtggctggtctagggtgcatcgatgaccaaactcctgattgtccatct
ggtcaccatcgcagaccgctcagtccgacagcacagcagaaacgagcagagcagaggagg
agagagatcctgcttctgggccccgtagcgttggactctccagaggaggatgagggttgt
gatgaggagggacagggcaatgagatggagggatttgaggctgagcagcagggggtaggg
gaggctccagaggcagagcagaacggagccatgggaggttcgtcctcgcggagctccagc
ggggtgacaggaagcctgggagacagagactgtgtgtcccctgagtccagtcagtccagt
caccagagcaacgagaccggggccgccacctcaggaatacagacggacagtggctgtgca
ttgcctgtgccctcgctccattgtcaaaggatcgctcgtgccaagtgggagtttttattt
gggacccctgctgaggaggctgctagcaggggagagaaaaattctctggaagcctccaca
gctcctcccagtggtaactccagcgagtctcccacaccaactccccctttctccctccct
ctgctttctgccaatcacaacgtacaacaagttgaggtagagctggtgacccctcctcca
gctgtcatcgggacttcccccaaaactggcattattcgccggaccttaaagtactcagaa
actgaccttgatgcagttcctcttcgctgctaccgagagacggacatagacgaggtgctg
ctggcggagctggacgacgccgactctgcgtttgggagtaaccgcagcgtccagggcacc
tcgggtacaggcagcagcccactggggggtctggcttatggtaggacagatggggaggtc
acagagaagagaaggggagagggtgaggaggaggaggaggaggaggaggaagaagaggag
gaggaggaggaggaggaggaggaggaagaagaagaagacgaggaagaaatggtgagctgg
gccagtgtgaggatgcaaggagacaacaggaagcagcagcatgcagctcaggaggaccca
gaggtgtttggtcaccttatgaagagaccaatggcaacattttttgacaaccaccacccg
gccctgaaatcccccatcttggtctccggccctcgctgtgctgcagaggacaccttcagc
cgccactttgagagcatcatggagtctcaccgagccaaaggcacctcgtacaacagcctg
gacagcgaggagctgcttacctcgagcacccaaaccgtcctgacctttgacctgcccaca
ttaacccctgccatccacggtccggtctgccagagcaccaggcagatcgtccagctcagc
ttcgccccactggcacacgatgagaggcccagtatctccgattcaatcttcaccatgact
ggggactcggacgccaccagagccccgtccagcgagaggctgagcagcggttcggacgac
acgccacccaaaggacgagggtattcacagctggggagcagctggtacagcaacccttct
ttctcattaccaagcagggacaaggcccgcctggcgacagattcggagctggaccaggac
ctcagtgagcggctgggtctgggcagcagtgagaccctcaccaatggcagccaccgtgct
gacgtggcagccgccagacgcctggccaaacgtctcttcaacttggacggcttcaggaag
tccgatgtggcgcggcacctcagcaagaataatgacttcagccgaatggttgcagaagag
tatctgagcttcttcgactttgcgggcctcgctattgaccaggcattgcggactttcctc
cggcagtttgccctgatgggggagactcaggagagggagagggtgctggcacacttttct
aagcgttatttggactgcaacccaaaagtcataccatcagaggatgcagttcacactctc
acctgcgccgtcatgctgctgaacactgatctacatggtcagaacatcggtaagaggatg
tcgtgcacgcagttcatcagcaacctggagggactgaacgacggccaagattttcacaag
gatctgcttaaagctctctacaactcaatcaagaatcagaagctgcaatggacactcgac
gaggaagagctgcggaagtcgttctcggagctcggggacagcctgtgtgactccaccgcc
tccagatctctgaaggcggagggcagcagtgggaagcccccgacagaggaggcgcatccg
tccgggtcgctgctctacaagaacggcttcctcgtccgcaaagtgcacgcagactctgac
ggcaagagaacaccaagagggaagagaggttggaagaccttctatatcatcctcaaaggg
cttattctctatctgcaaaaaggggagtacaggcctgacaaacagctatcagaggaggac
ctgaagaacgctgtgtccatccaccactctctggccatgaaggcttcagactacagcaag
agacccaacgtcttctacctgcgcaccgccgactggagggtgtatctcttccaggccccg
aacgcggagcagatgcagtcttggatcacaaggatcaacacggtggccaccatgttctca
gctcctcctttcccagccgccatcggctcccagaagaagttcagccggccgctgctgcct
gggaccatgtcaaagctgtccgaggaggagcaggtcagatcccatgaaaaccgcttcaga
gccctgtccactgagctgactgagctacgctcctacccccccgaccgcaaggtcaaaggg
cgcgagctggaagagtaccggcagcgggatgagtacctggagtttgagaaaacccggtac
gggacgtacgtcatgctgctgcgagctaagatccggagcggtgaggaggacctgtctctg
ttcgagtcccagctgctggaggacaacagtctgcagagggcccactccagccccacgctg
caggacagcagccaggccagccaggtgagcaaggccagcagcgcccgggacgggggcaac
agcagcagggccagcggctgcagcggcaagctgcggcaggacggccagagacacagctac
cggcaggccgtcaaaaagtga
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