Trematomus bernacchii (emerald rockcod): 117473717
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Entry
117473717 CDS
T09643
Symbol
pde6c
Name
(RefSeq) cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' isoform X1
KO
K13757
cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' [EC:
3.1.4.35
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00230
Purine metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117473717 (pde6c)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
117473717 (pde6c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDEase_I
EABR
GAF
GAF_2
GAF_3
Mitoshell_1st_helical
HD-CE
Motif
Other DBs
NCBI-GeneID:
117473717
NCBI-ProteinID:
XP_033975373
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSKGAKETIVTRLGFKSSSSASKAEAELEKVRKENAHLRKKIDELAKRHIKPPDSDKSKL
LERILSLETLRERNNQQLLVKEQDLETMRRQLSAKGGEVVASLQAQLEQRRKEADQRDTM
FHSLSQETGNLKNQLTTVSARCQSLETQATNGQVPPADLALVQDQLRDALEKNQQWLAYD
AQREGYVQSVLARTLELEQQLAKQQPIRQEAASDVPEKDAELKRHYEQQLLGVQNNLERQ
KDQATRGQEELSVQREQTLNAQAELRSHKEQVSRLQEEMAALQRRYEDKSSELSSFLRRY
EEKSKESQDVKMQLQAERHGSRHAVSEERKVLSERSDRMRMELESMDMRLEEERKRSAEL
LLQVNMLQKSLLSQNEEQRRIAALEQQNPKFSDFVDKQTGYKTKCTLTFPLMAERECLGV
VMALNKIGADTFSPEDEKLFHKYMNFAQVISLQHHTNYMFNVESRRSQVLLWSASKVFEE
LTDIERQFHKALYTVRIYLGCERYSVGLLDMTKEKEFYDEWPVKLGDVEPYKGPKTPDGR
EIIFYKIIDYLLEGIKEEIKVIPGPPIDHWALVSGLPTYVAENGFICNMMNVAADDFFTF
QKEAVDESGFVIKNCLSLPIVNKKEEIVGIATFFNRKDGKPFDEHDEQITEALTQFLGWS
VLVCDTYDRLNRMEWRKDIAQDMLLYQTKCTSAEMQSILNTNEKFDAEPEDLDQKEMYKL
LRANCPPADNVTGENLYLFSFSDLNVSETDLIRAGIRMFFELGVVEKFKVPAETLTKWMY
TVRKGYRSITYHNWRHGFNVGHTMFCLLQTGKLRKYYSDLDAFAMVAAAFCHDIDHRGTN
NLYQTKSQHPLAKLHGSSIMERHHLEYSKTLMGDETLNIFCNLQKRQFENVQHLFDVCII
ATDLALYFKKRTMFQNIVNATEPMPDEKEAINYISNNPTRKEIIMAMMMTGCDLSAICKP
WEVQSKVALMVAAEFWEQGDLERSVLDQQPIPMMDRNCSEQLGKMQCGFIDFVCSFVYKE
FSRFHKEITPMFDGLKNNRCEWNKHAEIYTAKMKIIEDEKKKLEDDENKKGGGDGKSKTC
TIC
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggagccaaagagaccatcgtcaccaggttgggcttcaaatccagcagctct
gcttccaaggctgaggcagagctggagaaagtcaggaaggagaacgctcacctcaggaaa
aagattgatgaactggccaaacgacacatcaaaccccctgactcagacaaaagcaagctg
ctggagaggatcctgtcccttgagacgctgcgagagagaaacaatcagcagttgcttgtt
aaagagcaggatctagaaacaatgagacggcagctgtcagctaaaggaggagaagttgtg
gcatccctgcaggcccagctggagcagcggaggaaggaggccgatcagagagacacgatg
ttccacagtttgtcacaggagacggggaacctgaaaaaccagctgaccactgtttctgcc
cgctgccagtccctggaaacacaggcgacgaatggacaggtgcctcctgcagacttggct
ttggttcaagatcaactgagagacgctcttgagaagaaccagcagtggctggcgtacgac
gcgcagagagaaggctacgtccagtcggtcctcgcccgcacgctggagctggagcagcag
ctggccaagcagcagccaatcagacaagaggcagcatcagatgttccagagaaggacgct
gagctgaagcggcactatgagcagcagcttttgggggtgcagaacaacctggagaggcaa
aaagatcaggctaccagaggccaggaggagctcagtgtgcagagggaacagacgttgaac
gctcaggcggagctgcggtctcataaggagcaagtcagccggctccaggaggagatggcg
gcgctgcagaggaggtacgaggacaagagcagcgaactgtcgtcgtttctgaggaggtac
gaagagaagagcaaagagtcgcaggacgtaaagatgcagctgcaggcggagcggcacgga
agcagacatgcagtgagcgaggagagaaaggtgttgtctgagcgctcggacaggatgagg
atggaactggagagtatggacatgagactggaggaggagaggaagagatctgctgaactt
ctgctgcaggtgaatatgctgcagaaatctctactgagccaaaatgaagaacagaggaga
atcgcagcgttggagcaacagaaccccaaattctctgactttgtggacaaacagaccgga
tacaagactaaatgcacacttacttttcctctgatggctgaaagagagtgccttggagtt
gtcatggcacttaacaaaataggagcggacacattctctccagaggatgagaagctcttc
cacaagtacatgaactttgcccaagtcatctccctgcagcatcacacaaactacatgttc
aatgtggagtccagaaggagtcaggtgctgctctggtcggccagtaaagtctttgaggag
ttgacagacattgagagacagttccacaaagcgctctacactgtaaggatctatctcgga
tgtgaaagatactcagtgggcctgttggacatgaccaaagagaaggaattctatgatgaa
tggcctgtgaaactgggggatgtggaaccctataaaggaccaaagacgccagacggcagg
gaaattatcttttacaagattattgactacctcctggaaggcatcaaagaagaaatcaaa
gtcatacctggtccgcctatagaccactgggctcttgttagcggcctgccaacctacgtt
gcagagaatggctttatttgcaacatgatgaacgtggctgcagatgatttcttcactttc
cagaaagaggctgtggatgaatcaggttttgttatcaaaaactgtctgtcgctgcccatt
gtcaacaagaaggaagaaattgtgggcatcgccactttcttcaacaggaaagacggcaag
ccatttgatgaacacgatgagcagatcactgaggccctgactcagttcttgggttggtcc
gtgctggtttgcgacacctatgaccggctgaaccgtatggagtggaggaaggacatcgcc
caggatatgctgttgtaccagaccaaatgcacctcagctgagatgcagtccatcctgaac
accaatgagaagtttgacgcagagcccgaagacctcgaccagaaagagatgtacaaactg
ttgagagcaaactgcccgccagctgacaatgtcaccggagagaacctgtacctgttctcc
ttcagtgacctcaacgtctccgagaccgacctcatcagagccggcattcgcatgttcttt
gagctcggagttgtggaaaagtttaaagttcctgcagagacactgacgaaatggatgtac
acggtgaggaaggggtaccgttccatcacctaccacaactggaggcacggcttcaacgtg
ggccacaccatgttctgcctgctgcagacagggaagctgaggaagtactactctgatcta
gatgccttcgccatggtggctgctgctttctgccacgatatcgaccacagagggaccaac
aacctctaccagacaaagagtcaacatcctctggctaaacttcatggctcctccatcatg
gagaggcaccatttggagtacagcaagacgctcatgggtgatgaaaccctgaacatattc
tgcaacctccagaagcgtcagtttgagaacgtgcagcacttgtttgacgtctgcatcatc
gccactgatctggccctttacttcaaaaagagaaccatgttccaaaacattgtgaatgcc
acagagccaatgccagacgaaaaggaggccattaactatatttccaacaatcccaccagg
aaggaaatcataatggccatgatgatgacaggctgtgacttgtcagctatctgcaaaccc
tgggaggtacagagcaaggtggccctgatggtcgctgctgaattctgggaacagggagat
ttggagagaagtgttttggaccaacagccaattcccatgatggacagaaactgttctgaa
cagctaggcaagatgcagtgcggtttcatcgacttcgtgtgctcctttgtgtacaaggag
ttctccaggttccacaaagagatcacgcccatgtttgacggtctgaaaaacaacaggtgc
gaatggaacaagcatgccgagatatacaccgcgaagatgaagatcatcgaggatgagaag
aagaaactggaagatgatgagaacaaaaaaggtggtggcgacgggaagtcaaagacctgc
accatctgctaa
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integrated database retrieval system
