Trematomus bernacchii (emerald rockcod): 117473724
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Entry
117473724 CDS
T09643
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tben03032
]
117473724 (top2a)
03036 Chromosome and associated proteins [BR:
tben03036
]
117473724 (top2a)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117473724 (top2a)
DNA replication proteins [BR:
tben03032
]
Eukaryotic type
DNA Topoisomerases
117473724 (top2a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
117473724 (top2a)
Centrosome formation proteins
Centriole proteins
117473724 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
117473724
NCBI-ProteinID:
XP_033975384
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MAQPLKNFLENKPLDKTNKDLKRMSVERIYQKKTQLEHILLRPDSYIGSVEPVTQQLWVY
DEVLGLNSRDVTFVPGLYKIFDEILVNAADNKQRDKSMNCIKINIDVENNTISVWNNGKG
IPVVQHKVEKVFVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACK
ESKKNFKQTWYDNMSRTGDSKITPFGGDEFTCVTFTPDLSKFKMRTLDKDTVALMTRRAY
DIAGVSKGVRVVLNGKKIPLTGFRSYVNMYLKDRLDEVGNPLTVVHEIVNDRWEVCLTMS
EKGFQQVSFTNSIATTKGGRHVDYVADQVVAKLIDVVKKKNKAGVAVKPFQVKNHLWLFV
NCLIENPTFDSQTKENMTLQQKTFGSVCPLGAHFIKEAISCGIVESIMNWVKFKAQNQLN
KKCSSVKHTKIKGVPKLDDANDAGGKNSISCTLILTEGDSAKTLAVSGLGVVGRDRYGVF
PLRGKMLNVREATLKQIMENNEINSVIKILGLQYKKNYSDPESLKTLRYGKIMIMTDQDQ
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKVSHKKEHISFYSIPEYNAWKDTKTN
LKSWRTKYYKGLGTSTSQEAKEYFSDMQKHRIPFKYGGPADDEAITLAFSKKKIEERKLW
LTNFMLDRRQRRAHNLPEDFLYGANTKSLSYNDFVNKELVLFSNSDNERSLPCLVDGLKP
GQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIVGLAQNFVGSNNLNML
QPMGQFGTRLHGGKDSASPRYIFTMLSPLTRLIFPNMDDNLLKYNIDDNQRVEPDWYIPI
IPMVLVNGSEGIGTGWASKIPNFSVREIVNNIRRMIAGEEPQLMLPNFKGFKGTIDNVVD
NAYIVSGEVAIIDSTTIEISELPIKTWTQNYKENVLEPMMNGTEKVPPLITDYREYHTDT
TVRFLIKMTPEKLIEAEAAGLHKVFKLQNNLTCNSMVLFDHMGSLKKYESVLEILRDFFE
LRMKYYLLRKDWLVGMLGAEGAKLSNQARFILEKIEGTLVIENKPKKELIRMLQEMGFDS
DPVKAWKQAQEKNVDIVEEEPAEEGVEVVDASGPDFNYLLSMPMWYLSKEKKDELCKQRD
NKLTELSTLEKKSPSDLWNEDLAAFCEELERVEKKEKEEAEMPIVKKGGGRTKVVKVKQE
TLPTPQGRRVVPRITSAMKAEANKKAILRKGGKKVKGEDVVMKMEFEEDSENTEPSEDNG
LAAPVRKRTKTQPKEKGEKAASKTGKQSTLQFKAVGKKPKKIASDEESDEESDEASDDMF
DNMSDDEMNSEEVIAPRVGRTSKVPVKYSMSDSEDDFDDVGKKSAPKRKPVISDDDSFLP
EPMSDREVDSPVPPPKAPEPAKKTAISKPAAKAAQAKSSSQSDDAVPAPKAPVQRKPRAA
APKKPAAARKPAAKKSPVLDVRQPSIMDSLTKSKPVSTTATKNYPSFDSSDSEAEAKAAK
AKPKLVAKRKQVLSDDSDSSGDLMSRLKAKKTTSKKTKRWDEDESFNISDQEAVAPVDTA
VREVPARARKAVIYKLDSDSESS
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccactgaagaacttccttgaaaacaagccgcttgacaagacaaacaaagat
ctgaagcgaatgtcagtggagaggatctatcagaagaagacccagttggagcacattttg
cttcgaccggactcctacatcggctctgtggagcctgtcacccaacaattgtgggtgtat
gatgaggtgctgggactgaactcccgtgatgtgacgtttgtgcctgggctttacaagatt
tttgacgagatccttgtaaacgcagctgacaacaagcagagggacaagagtatgaactgt
atcaagatcaacattgatgttgaaaacaacaccatcagtgtgtggaataatgggaagggt
attcctgtggtgcagcacaaggtggagaaggtctttgtgccggctctcatctttggacag
ctcctcacctccagtaactatgatgatgacgagaagaaagtcactggtggacgcaatgga
tatggtgctaagctttgcaacatctttagcaccaagttcactgtggagactgcctgtaaa
gagtcaaagaagaatttcaagcagacttggtatgacaacatgagcaggacaggggattct
aaaatcacaccctttgggggagatgagttcacttgcgtcaccttcacgccagacctgtcc
aagtttaaaatgcgcaccctggacaaagacacggtggctcttatgaccaggagggcgtac
gacatcgctggagtctccaaaggtgtccgtgtggtcctcaacggcaagaagatcccactt
acaggcttccgtagctacgtgaacatgtatctgaaggacaggctggacgaggttggcaat
cccctcaccgtggtccacgaaatcgtcaacgaccgctgggaggtctgcctcaccatgagt
gagaaaggtttccagcaagtcagcttcaccaacagcattgccaccaccaagggagggagg
cacgtcgactatgtggctgaccaggtggtcgccaagctcattgatgtggtgaagaagaag
aataaagccggggtggccgtcaagcctttccaggtgaagaaccacctatggctgtttgtc
aattgcctgattgagaaccccacctttgactctcagaccaaagagaacatgacactgcag
cagaagacctttggatccgtctgtcctctcggtgcacacttcattaaagaggccatatcc
tgtgggattgtggagagtatcatgaactgggtgaagttcaaggctcagaatcagctcaac
aagaaatgctcgagtgttaaacacaccaaaatcaaaggggtgcctaaactggacgacgcc
aacgacgcaggtgggaagaactccatcagctgcacgctgatcctcactgagggagactcg
gccaagacgttggctgtgtccgggctgggggttgtcggcagggaccgatatggcgtcttt
cctctcagaggaaaaatgctcaacgtccgggaggccacgctcaaacagatcatggagaac
aatgagatcaacagcgtcattaagatcctcggccttcagtacaagaagaactacagcgac
ccagaatccctcaagactctgcgctatggcaagatcatgatcatgacagatcaggatcaa
gatggctcccacatcaagggccttttgatcaacttcatccaccataactggccgtctctg
ctgcgccacaacttcctggaagagttcatcacccccatcatcaaggtgtcacacaagaag
gagcacatctctttctacagtatccctgaatacaatgcatggaaggacacgaagaccaac
ctcaaatcttggagaacaaaatactacaaaggtttgggtaccagcacatcgcaggaagcc
aaggagtacttctcggatatgcagaaacatcgcatcccgttcaagtatggcggacctgca
gacgatgaagctatcacccttgcctttagcaagaagaaaattgaggagaggaaactgtgg
ctgaccaacttcatgttggaccggcgccagcgcagagctcacaacctgcctgaggacttc
ctgtacggtgcgaacaccaagtccctctcttacaacgactttgtcaacaaggagctggtg
cttttctccaactctgacaatgagaggtccctcccgtgcctggtggacggtctgaaaccc
ggccagaggaaggtgctgttctgctgcttcaagaggaacgacaagcgtgaggtgaaggtg
gcgcagctggccggatcggtggctgagatgtcagcctatcaccatggagagatctctctg
atgatgaccattgttgggttggctcagaactttgtgggaagcaacaacttgaacatgctg
cagccgatgggtcagtttggaaccaggttgcacggaggcaaggactctgccagccctcga
tacatcttcaccatgctcagccctctgactcgcctcatcttcccaaatatggacgacaac
cttctcaagtacaacattgatgacaaccagcgcgtagagccggattggtacattcccatc
atccccatggtgctggtgaacggcagcgagggcattggcaccggttgggccagcaagatc
cccaacttcagcgtccgagagatagtcaacaacatccgccgtatgattgctggagaagag
cctcagctcatgcttccaaacttcaaaggcttcaaaggcacaatcgacaacgtggtggac
aacgcgtacatcgtcagtggagaggtggccatcatcgactccaccaccatcgagatctct
gaacttcctatcaaaacatggactcagaactacaaggagaacgttctggagcccatgatg
aacggcacagagaaagtccctcctctgatcactgactacagggagtaccacaccgacacc
accgtgcgctttctgatcaagatgacccccgagaagctgatcgaagccgaggctgccggc
ctccacaaagtcttcaagctccagaacaacctcacctgcaattctatggttctgtttgac
cacatgggcagcctgaagaagtacgagtctgtactggaaatcctccgggacttcttcgag
ttgaggatgaagtattatttgctgagaaaggactggttggtgggcatgctgggagctgaa
ggcgctaaactcagcaaccaggcccgcttcatcctggagaaaatcgagggcaccttggtc
attgagaacaagccaaagaaggagctgatccgcatgctgcaggagatgggcttcgactcc
gacccagtgaaggcttggaaacaggctcaggagaagaatgttgatattgtggaggaagag
ccggccgaggaaggagtggaggtggtggacgccagcgggccggacttcaactacctgctg
agcatgcccatgtggtacctgagcaaagagaagaaagatgagctttgcaaacagagggac
aacaagttgacagagctgagcaccctggagaaaaagagtccatcagacctgtggaacgaa
gacctggctgctttctgcgaggaactggagagggttgagaagaaggagaaggaggaggct
gaaatgcccattgttaaaaaggggggtggcagaacgaaggtggtgaaggtgaagcaggag
acgctgcccacgccgcagggccgccgcgtcgtcccgcgcatcaccagcgccatgaaggct
gaagctaacaagaaggccattctgaggaaagggggcaaaaaagtcaagggcgaagacgtc
gtgatgaagatggagtttgaagaagattcagagaacacagagccaagcgaggacaacggc
ttggctgcaccagtgaggaagagaactaaaacccagccaaaggaaaagggtgagaaagct
gcttcaaagaccggcaagcagagcactcttcagttcaaggctgtggggaagaagcccaag
aagattgcgtcggacgaggagtcggacgaagagtcggacgaggcgtcggacgacatgttt
gacaatatgtccgacgatgaaatgaattcagaggaagtgatcgcccccagggtcggtcgc
acatctaaagttccggtgaagtacagcatgtccgacagtgaagatgactttgatgacgtg
ggaaagaagagtgctcctaaacgtaaacccgttatcagtgatgatgatagctttctcccg
gagccaatgtccgacagggaagtggactctccagtccctcctccaaaagctccagaacct
gcgaagaaaacggcaataagcaaaccggcagctaaagcagctcaggccaagtcgagctct
caatcagacgatgcggtgcctgctcccaaagctccagttcaacgtaaacccagagcagcc
gccccgaagaaacctgctgctgccaggaagccggccgcaaagaagtctccagtgctcgat
gtgaggcagccatccatcatggattctctcaccaaatccaaaccggtatcgaccaccgct
accaagaactacccgtcgtttgactccagtgactcggaggctgaggccaaagctgcaaag
gcgaagcccaagctcgttgccaagaggaaacaggtccttagcgacgactccgacagctcg
ggcgacctcatgtcacgtctgaaggctaaaaaaactaccagcaagaaaaccaaaaggtgg
gacgaggacgagagcttcaatatttcagaccaggaagcagtggctcccgttgacacggca
gtgcgagaggtgcccgcacgtgctcgcaaagctgtcatctacaaactggactcggactcg
gaatcaagttag
DBGET
integrated database retrieval system
