Trematomus bernacchii (emerald rockcod): 117473753
Help
Entry
117473753 CDS
T09643
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117473753 (med1)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
117473753 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
117473753
NCBI-ProteinID:
XP_033975441
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MAAGPGVSMQSASPARELSLSVQQAGNQTHGERIKSEEATEAEKQNRMAALLEKLHAKHN
AARPWQETCKIVRLAMEKRLVITAAGHPLMLTCLETLQRALKVSSLPSMTDRLESIARQN
LLGSHLSPSGTECYITSDMFYVEVQLDTNGQLVDVKVAHQGENPTSCPELIQHLREKNFE
EFSKHLKGLVELYKLPGDNKLKTKMYIALQSLELDLTKMMHMFRLATSANAVETILHGGV
GLLTARSGGHLVSLQCYVSPYDIFEEGPDSQLNSPDGIVPRSLGVSVSVTIEGTTATYKL
PIAPLISGSHPVDNKGTPSFSTVTNTNCVDLPACFFLKMNRPMPFSLSFIQRLGNATSIP
VFESPPALSPLCQLIVQSQRQLLEEGSSTPPPSRNMHFYFALPDQQHCYFLNSDAPVQDG
HSLQGVLVTKIPFRHPAQVPLLLDIIRHQAAYNNLIGSCVKRTSIKNDSAGLLQFEVCPL
TDSSFSVSFQHPVNESLVCVVMEVIDSRQVSCKLYKGLSDALICTDEFITKVVQRCMSIP
VTMRAIRRKAETIQADTPALSLIAQTVEIMVKNNLPPSGSPTYNMDGDGTNPMGLPGLAE
GNTPTGGPPGGHNFGGQIAPLYGASRGERQAQGGECLTQGGVAGQQQQQAGQGHVDDFNK
VTQNPILTSLLQITGSVGSSPSSQNAPQPHQTPPETSSPASNTKNHPMLMNLLKDNPTQD
FAALYASSPLERQNSSGSPRTENAGAACPGSNSKGKKKRPRGTEKGGVMPGTIPGGGGTG
LGMKLQQGSQLHHQVSHEDDFHRELLSMDVDASQNSIFDVNLTGDGLDTPHSITPAPSQC
GTPPSGPNMPYSQSHVQSQQPPGAVPPRMVRLSSSDSIGPDITEILSDLPEQTGKGSCGS
HGQHPMGSGGEDGGPLGTPIRDSSSSGQGSAVFDSADIFNTNSNENPFTDAADLIAEATA
TAATPNSDSSSTNFFHAADFNPDLLTSGHGFPQNYFDDSSPSADGDMDLVKGFGGSSQQN
TPSGTPQNPTPHGQSTPEPSLKDPFDMGIVFGGNSGSGKPLLVQAPDLGDTHGGGSQSPL
PIGLAAACADFKSAEPKIKPQQGLVRPKDENGGSGGSSSGMGMGMGMGMAMGMGSTSTEG
KQVKRSRTPSSEGKSKEKPPKRKKLDPDGKSPSHSSGGRPYTPPSGGSGSGGSISGGGSK
SPGSSGHSQTPPGGATPPIPKITIQIPKGTITGGKTSSHSGYTSSSSASSNTGGAGGTSS
SKSHHSHSSSSGKIKSKEGSTTQGSSSSGSKPGSAGMGSGGGPSQSKGSSQGISVGKPGT
SPITKHGLSGPGGVSGSGIGSSSKMKPQGGKPPGSLMNPNIKPNISPSHSRSSDKLSSPM
KMQQSQVPGTPPSSKAKSPMGSGGGGSSGGSKSSSGGGMSSQKQPIGGGSSGPASSSSSS
SSSSSSGLMTYPGASQSQYGGGGGGGGGGGSGGGGGCGSGSSGGGGGSGGGSSGGAGQNN
ANNPNAKGKSPSRNKKPSLTAVIDKLKSVGGGGVGEDGCEIGPPVTGPGSAPGGGPGNVP
GSGPSNVGPSKHSSSSQSGEYKREKSDKETKPKVSVSGGNSGDKKLMDPKTGGASATGLA
KIIISKPDGGSPSIKAKVTLQKTGDGSGDASMRPQISSLKASPLFSGSTPKHDRSSPSHS
RSPGFTPLNHDSESESGSSSVAEKSHQNSPSSDDDQSVRPLPPQDYMSSIPHSSGEKHKK
HKKEKKKQKEKERERDRDRDRDRDKEKKKSSMSMGPSSHPIKADSWSRSPISASDSSLSM
LVSERPSRPSPMYMRNEDDDLMDSALTGNL
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggcccggtgtttctatgcagagcgctagccctgcgagagagctttctctc
tcggtccagcaagcagggaatcagactcatggagaacggatcaaatccgaagaggcaaca
gaggcggagaagcagaatcgcatggctgctttgctggagaagcttcatgccaaacacaat
gctgcaaggccatggcaggagacctgcaagattgtgcgtctggccatggagaaacgctta
gtgataactgctgcaggtcacccgctcatgctcacctgcctggagaccctgcagagagcg
ctgaaagtctcgtctctaccctccatgacagatcgtctagaatccatcgctcggcaaaac
ctgcttggctctcacctcagcccatcagggacagagtgttacatcacgtcagacatgttt
tatgtggaggtgcagctggacacaaatggccagctagtggacgtcaaggtggctcatcag
ggagaaaaccctacgagttgtcctgagctgattcagcatctaagggagaagaactttgaa
gagttttccaaacatctgaagggactggtcgaactctataagctccctggggacaataag
ctgaaaaccaagatgtatatagccttgcagtctttggagcttgacctcaccaagatgatg
cacatgtttaggttagcaaccagtgctaatgcagtggagactattctccatggcggtgtg
ggcctgttgactgcaagaagtggtggccatcttgtttctcttcagtgttacgtgtcccct
tatgacatatttgaagagggaccagactcacagctaaactcaccagacggcattgttcca
cgctctctgggtgtcagtgtttctgtgacaatcgagggaaccaccgctacctataagctc
ccaattgccccactcatctctggatcacaccccgtggataacaaggggacaccttccttt
tccactgtgaccaacacaaactgtgtggacctgccagcttgttttttcctcaagatgaac
cgcccaatgcctttctccctctcctttattcagaggctgggcaatgctacttcgatccca
gtgtttgagagcccccccgccctctcacctctctgccagttaattgtgcagagccagcgc
cagctccttgaggagggcagctccacgccgccaccttcacggaacatgcacttctatttt
gcattgccagatcagcagcactgttatttcctgaatagtgatgccccggtgcaagatggt
cactctctacaaggagttctggtgaccaagatccccttccgccacccggcacaagtgccc
ctcttgttggatatcatccggcaccaggcagcctataacaacttgattggcagctgtgtg
aaacgcacttccatcaaaaatgatagcgcaggcctgctgcagtttgaagtatgtcctctc
accgactccagtttcagcgtctcgttccagcatccagtcaatgagtcattagtctgtgtg
gtaatggaggtgattgactccagacaggtatcatgcaagctatataaaggactgtcagat
gctctgatctgcactgatgaattcatcaccaaagtagtccagcggtgcatgtccatccca
gttaccatgcgggcaattcgaaggaaagcagagaccatccaggcagacactccagctctc
tccctaatcgcacagacagtggagatcatggtgaagaataacctgccaccctccggtagt
cccacctacaacatggacggcgatggaactaaccctatgggactgcctgggctcgcagag
ggcaacacaccaaccggaggaccccctgggggacataattttggaggtcagattgctcct
ctgtatggggcttcccgcggagaaaggcaagcccagggaggagagtgcctaacccagggt
ggggtggctggccagcaacaacagcaggctggtcaaggccatgtagatgacttcaacaaa
gtcactcagaatccaatactgacaagtctgttacagataactggaagtgtgggttctagt
cccagctcccagaatgcaccacaaccccaccaaactccacctgaaacatcctcccctgcc
agcaacaccaagaatcatcctatgttgatgaacttgttgaaagacaaccccacacaagat
tttgctgcgctctatgcttctagtccattggagaggcagaattcttctggctccccaagg
accgagaatgcgggtgcagcatgccctggaagtaattcaaaaggaaagaaaaagcgccca
cgggggacagaaaagggtggtgttatgcctgggactatcccaggtggtggaggtaccggt
ttaggcatgaaactacaacagggatcccagctccaccatcaagtctcgcatgaggatgac
ttccaccgtgagctgctctctatggatgtggacgcatctcaaaattctatctttgatgtt
aatctgactggtgatggcctagacacgccccatagcatcactccagcacctagccaatgt
ggaacaccgccctctggccccaacatgccttattcacagtctcatgtccagtctcaacaa
ccgccaggagctgtcccacctcgtatggtccgcctctctagctccgacagcatcggccct
gatatcacagaaatcttatcagatctgcccgagcagacgggcaaaggcagttgtgggagc
catgggcagcaccccatgggaagtggtggggaggatggaggccccctaggtacccccatc
cgtgactcctccagctccggtcagggcagcgcagtgtttgactcggcagacatttttaac
accaacagcaatgagaatcctttcactgatgctgctgacctgattgctgaggcaactgca
accgctgccacgcccaacagcgattcttcttccaccaacttcttccatgctgctgacttc
aaccctgacctcctcacctcaggccatggctttccccagaactactttgacgacagctcg
ccaagtgcagatggagacatggaccttgttaagggtttcgggggaagtagccagcagaat
actccatcaggaacaccacagaatcccactccccatgggcagagcacccccgagccatcg
ctgaaggacccttttgatatggggatagttttcggaggcaacagtggtagtggtaaacca
cttcttgtgcaagctcctgatctgggagacacacatggcggagggtcacagagccccctc
ccaataggccttgcagcggcatgtgctgattttaagagtgcagaacccaaaattaaaccg
caacagggacttgtgcgaccgaaagatgaaaatgggggtagcggagggagcagttctggg
atggggatggggatgggtatgggtatggcgatggggatggggagcacttcaacagagggc
aaacaggtaaaacgtagcaggaccccatccagtgagggaaagtctaaagagaaacctccc
aaacgcaaaaagctggaccctgatggtaagtccccctctcacagctcaggggggcggccc
tacacccctcctagtgggggctcaggctctgggggaagcataagtggaggaggctcaaag
tctcctggtagttcagggcactcacaaactcctcccggtggtgccactcctccaatcccc
aaaatcaccattcagattccaaaagggaccataactgggggcaaaacatcatcccatagt
ggatacacctccagcagctcagcctctagcaacacaggtggagcaggaggaaccagcagc
agcaaaagccatcattctcactcgtcttcctctgggaaaatcaagtccaaagaaggctcc
acgacacaaggcagcagcagcagcggctccaagccaggaagtgcagggatggggagtgga
ggtgggccatcccaatctaaaggctcctcccaaggaattagtgtaggtaaaccaggaacc
tccccaatcaccaaacatgggctctctgggcctggaggtgttagtggtagtgggattgga
agtagtagtaaaatgaagcctcagggggggaagcctcctgggtcacttatgaatcccaac
ataaagcccaacatctccccttctcactcccgcagctctgacaaattgtcctcccctatg
aagatgcagcagtcccaggttccaggaacacctccttcttccaaggctaaatcaccaatg
ggctccggaggaggcggcagctctggaggttccaagtcttcttctggtggaggcatgagc
tcccagaagcagcccattggtgggggctcctctggtccagcatcttcctcatcatcgtcc
agctcttcctcgtcctctggtttgatgacctacccaggcgcctcccagtctcagtatggg
ggtggaggtggaggtggagggggaggcgggtcaggaggaggaggaggatgtggaagtgga
agcagtggtggaggtggaggaagtggaggcggaagtagcggtggggctggtcagaacaat
gcaaacaatcccaacgccaaagggaagtcgcccagtcgaaacaagaaaccctctcttacg
gcagtcatcgacaaactgaagagtgtaggtggaggaggtgtaggggaggatggttgtgag
attgggccaccagtaactggtccaggatctgctcctggtggtggtcctgggaatgttccc
ggcagtggaccttccaacgtgggtccttccaagcatagctcatcatctcaaagtggggag
tataagcgggaaaagtccgataaggagacaaaacctaaagtgtctgtttccggtggcaac
agtggggataaaaagctgatggacccaaaaacaggaggggcgagtgcaaccggtctggcc
aaaattatcattagcaaacctgatgggggctcaccaagcatcaaggccaaagtgaccctt
cagaaaacaggggacggatctggtgatgcctctatgcgtcctcaaatttctagcctcaaa
gcatcgcccctcttcagcggctccactcccaagcatgaccgctcctccccgagccacagc
cgctcgccaggattcaccccgctcaaccacgacagcgagagcgagtcgggcagcagctca
gtggccgagaagtcccaccagaacagcccgagctcagacgacgaccagagcgtccgcccg
cttcccccccaggactacatgagctccattcctcacagctcaggggagaagcacaagaaa
cacaagaaggagaagaagaagcagaaagagaaggaacgggagagggacagagaccgagat
cgggaccgggacaaagagaagaagaagtcctcgatgtccatggggccgtcatcgcatccc
ataaaagcagacagttggtcccggtcacccatctctgcttcagattcctctttgtccatg
ttggtgtcagagcgtccatctcggcctagtccaatgtatatgagaaatgaagacgacgac
ctcatggactcagccctcactggcaacctttaa
DBGET
integrated database retrieval system
