Trematomus bernacchii (emerald rockcod): 117473762
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Entry
117473762 CDS
T09643
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117473762 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473762 (nrxn1a)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117473762 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117473762
NCBI-ProteinID:
XP_033975454
LinkDB
All DBs
Position
Unknown
AA seq
1490 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAHGEALEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYIGGVTPELHSSPLRLTSPSVREHPP
FRGWITGVSINGTQSTLESSGGVTVTTGCGPDHQCQNGGVCSVVNDQAVCDCSNTGFQGN
DCSEEHSYTPGLAHLMIGDQGKLRAREDYVATFKGSEFFCYDLSPNPIQSSSDEITLSFK
TLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVKVT
RNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNN
FMGCLKEVVYKNNDVRLELSKLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVAL
SKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQERKDPRAPPTLKVDFFAIEMLDGHLY
LLLDMGSGTTKTRAMDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDE
TLYLGGLPEERAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPS
CSREQPKQCMSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQL
PVAMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTA
SKGPETIFAGSGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEGQMAGDHTQLEFHNVETGI
VTEKRFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRS
RSSFVTLPTLQAYYSMHVFMQFKTTSPDGLVLYNRGDGNDFIVLELVKGYLHYISDLGNG
AHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGV
SKEMYRELPKLVHSREGFQGCLATVDLNGRLPDLLADALATIGQVERGCEGPSTTCQEDS
CSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTRADR
LALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGK
YHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGR
QLTIFNSQTTVRVGGGGGERNAGMFQGQLSGLYYNGLRILNMAAEGHPHIRVDGSARLVG
DMPSSSITPQSSAAAGGNRSDSAPSISDITTTTATNKKQGATQQSADDLLVASAECPSDD
EDIDPCDPSSARPPLPDGKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYR
NRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcatggcggtgtgtgtgtgggcggcagcccccctgctcttcctggggctgtgc
ctgtgcagcgtggggggccaggcccatggggaagccctggagtttggaggcgtgtccagc
cagtgggggcggtttccggtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaggagggcctgctgctctacctggatgatgagggcttctgtgacttt
cttgaactgttgcttctccacggccacctccgcctgcgcttctcaatcttctgtgctgag
ccagcagaactgcaatcaggtgtggctgtgagtgatgggcactggcacgcagtgcgtgtc
aagagggactggaggaacacctctttggaggtggacggacgactggagggttgggcggaa
gtgaagagcaagagaagagacatgaccgtattcagccacacctacataggcggggtgacg
ccagagctacactcctcgccgctgcgcctcacatccccttcggtacgggaacaccccccc
tttcgtggctggatcacgggggtgagcatcaacggcacacaatcgacgttggagagctca
gggggcgtcacagtaacaactggctgtgggccggaccaccagtgccaaaacggaggggtg
tgcagcgtggtcaacgaccaggccgtctgcgactgctccaacaccggtttccaagggaac
gactgcagcgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
ggaaaactcagagctcgagaggattacgttgcaaccttcaagggctccgagttcttctgc
tacgacctttcgcccaaccccatccagtcgagcagcgatgaaatcacgctttccttcaag
actctgcagcgcaacggcctgatgctgcacaccggcaagtcggccgactacgtcaaccta
gctctgaagaacggggccgtgtcactcgtcatcaacctcggctccggggccttcgaggcc
ttggtggagcccgtcaacggcaagttcaacgacaactcctggcacgacgtcaaggtcacc
cgcaacctgagacagcactcaggcattggacacgctatggtgaccatctctgtggacggc
atcctgaccaccactggctacacccaggaagattacaccatgctgggctccgacgacttc
ttctacgtgggggggagccccagcactgctgacctgccaggttctccagtcagcaataac
ttcatgggctgtctcaaagaggtggtgtacaagaacaacgacgtacggttggagctgtcg
aaactggctaaacagggagacccaaagatgaaggttagtggggtggtgtcctttaagtgt
gagagtgtggctacgctggaccccgtgacctttgacacccctgagtctttcgtggcactg
agcaagtggtcagcgaagaaggcgggatccatctcgttcgacttcaggaccacagagcca
aacgggttgatgcttttcagccacggcaaaccccgacagcaggaacgcaaggacccacgc
gcgcctcctacactcaaggtggattttttcgccattgaaatgctggacgggcacttgtac
ttgctgctggacatgggctcaggaaccaccaagaccagggcaatggacagaaaggtcaac
gacggagagtggtatcatgtggacttccagcgggacggacgctcaggaaccatctcggtg
aacagtgtgaggacagcgtacacggccccgggagacagtgagatcctggatctggacgag
actttgtacctcggggggctacctgaagaacgcgctggactcatcttccctacagaggtg
tggacggctctgttgaactacggttacgtgggctgcatcagagatctgtttgtggacggg
cagagcaaagacatccggaggttggccgaggcccagagggcggtgggggtgaagccctcg
tgctccagagagcagcccaaacagtgcatgtccaacccctgtcagcacaacggcatctgc
agggagggctggaaccgctacgtgtgcgactgctccgggacggggtacctgggacgctcc
tgcgagagagatgcgaccatcctgtcgtacgacggcagtaagtttatgaaggtgcagttg
cctgtggcgatgcacacagaggcggaggacgtctcgctacgctttcgctcccagcgggcc
tacggggttctcatggcaaccacatcccgtaactccgcagacacccttcgtctggagctg
gatgggggccgtgtccgactcactgtcaacctagactgtatcaggataaactgtacagcc
agtaaaggcccagagaccatctttgcgggttcgggcctcaatgataatgagtggcacacg
gtgagagtagtccggcgtggcaagggcctgaaactcaccgtagacgacctgcagcctgtc
gaaggtcagatggcgggcgaccacacccagttggagttccacaatgtggagacgggtatt
gtgacggagaagcgcttcatgcctgccgtgccttccaatttcatcggccaccttcagggc
ctgacactgaacggcatgccctacattgacctgtgcaagaacggcgacatcgactactgc
gagctcaacgctgttattggctataagagcatcgtggctgaccccgtcaccttccgctcc
cgctccagcttcgtcacgttgcccacgctgcaggcctactactccatgcacgtcttcatg
cagttcaagaccacgtcccccgacggcctggtcctctacaacaggggagacggcaacgac
ttcattgtgttagagctagttaaaggctacctacactacatttctgacctgggcaatgga
gcacacctgatcaagggcaactctaacagtcctctaaatgataaccactggcacaatgta
cacatctccagagacactaacaatctccacacagtcaagattgacaccaaagtcaccacg
cagaccaccatgggcgccaagaacctcgacttaaagggtgacctgtacatcgggggcgtc
tccaaagagatgtaccgagaactgccgaagctggtccactcccgcgagggcttccagggt
tgcctagcaacagttgatctaaatggccgactccctgaccttttggctgatgcacttgca
accattggacaagtggagagaggctgtgaaggtcccagcactacatgtcaagaagactct
tgttcaaatcagggagtttgtttgcagcagtgggagggcttcacctgcgactgcagcatg
acgtcgtatgctgggccgctatgcaatgatgctgggaccacttatatctttggccgtgat
ggaggcgtggtggtttacacgtggccccctaatgagcgtcccagcaccagagcagaccgc
ctggccctggggttcagcacacaacagaaacacgccactctgctgcgggttgacagcgcg
tctggtctcggagactaccttcagctgcagatagacaaaggcaacattagagtagtgttt
aatgtcggcactgatgatatcaacatcgaggagagctccaagtttgtcaacgatggaaag
tatcacataattcgattcactcgcagcggaggcaatgcaacccttcaactggacgacctg
ccagtcatcgagcgctatccctcaggcaacattgataacgagcgcctggccatcgccaga
cagcgaatcccctatcggctcggtcgagtagttgacgattggctactcgacaaaggtcgc
cagctgaccatcttcaacagccagacgacggtacgtgtaggtggaggtggaggagagcgc
aatgcaggcatgttccagggtcagctgtccggactttactacaacggcctccgcatcctc
aacatggccgccgaggggcacccgcacatcagggtggacggcagcgcgcggctagtcgga
gacatgccgtcctcctccatcacgccgcagtccagtgctgcagctggagggaaccgctct
gactccgccccctccataagtgacatcacaaccaccacagccaccaacaagaaacagggt
gccactcagcagtcggcagacgacctgctggtggcgtcagctgagtgtcccagcgacgat
gaagacattgacccctgtgaccccagttcagcccgcccccctctgccggatgggaaggtg
ttcccgggtccgtctgaggtggtccgggagagcagcagcaccacagggatggtggtgggc
atcgtggcagccgcggccctctgcatactcatcctcctctacgccatgtacaagtaccgt
aaccgcgacgagggctcctaccacgtggacgaaagccgcaactacatcagcaactcagcc
acacagcccaacggcagcgccaaggacaagccgctggggatcgccaagatctccaagaac
aagaagaacaaagacaaggagtactacgtctga
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