Trematomus bernacchii (emerald rockcod): 117473765
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Entry
117473765 CDS
T09643
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117473765
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117473765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117473765
NCBI-ProteinID:
XP_033975483
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSEELNMYSSSPTSMTANGSDTKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESANKDHSLLGTPSGALASYSSGGGYSNSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSIFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDGVGEDDLRLLFSNSGGTVKAFKFF
QDRKMALIQMTSVEEAIQTLMELHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcggttggtgtgaagagaggctcagaggagctcaacatgtacagc
agcagccctacctctatgactgcaaacggcagtgacactaagaaacagcgtctggacgaa
tcccctccctccagagttctccacatcaggaaacttcccaatgaagtgtcagagactgaa
gtcattgctctggggctgccctttggaaaggtcaccaacatactgatgctgaaggggaaa
aaccaggcttttctggagctgggtacagaagaagcagccattacgatggtgaactactac
acagctgtcacgccacaggtccgaaacactcctgtcttcatccagtactctaaccataag
gaactgaaaacagactccgctctgaaccagagggcccaggcagtgctgcaggcggtgtca
gccgttcaggatggaagctctccatcctctgaccctggagttttagacctagctccaccc
cccagccctgtcctacgaataatcatcgacaacatgttttatcctgtcacactggatgtt
ctacaacagatcttcagtaagtttgggacggtaatgaagattataaccttcaccaagaac
aaccagtttcaggctcttctgcagttcagcgaacccgtcaatgcacaacaagctaaactg
tctttggatggacagaacatctataactcatgctgtactctgcggatagacttcagtaaa
ctggtgaacctcaacgtgaaatacaacaatgataagagtcgagactacaccagacctgac
cttcctactggagacggagagtcagccaacaaggatcactctttattgggtaccccatct
ggagcgctagcttcctactcgagtggaggaggatactcaaactctctctccctctcgcag
ggcggaggagccatcagtcctctgagcgccgcagcagcagcggcggcggcggctggtcgt
gttgctctgtccgggtccggagtgtcaggagtcctgttggcatcaaacctaaatgaagag
atggtcacgcctcaaagtatctttaccctcttcggagtgtatggtgatgtccagagggtg
aagatcctctacaacaagaaggacagtgctctgatccagctgtctgacggcaaccaggct
cagctggcgatgagccacttgaatggtcaaaaggtgtttggtaaagttatgagagtgacg
ctgtccaaacatcagactgtggctctgcccagagaggggctggacgaccaactgctaacc
aaagatttttctggctcacctctccatcgctttaagaagccaggctccaaaaacttccag
aacatctttcctccctctgcaacacttcacctctccaatgtccgggatggagttggagag
gatgatctccgccttctgttctctaacagtggaggaactgtcaaggccttcaagttcttc
caggaccgtaagatggccctgatccagatgacgtcggtggaggaagccatccagactctg
atggagcttcacaactatgacatgggaggaaatcaccatctgaaagtttccttttccaag
tctaccatctaa
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