Trematomus bernacchii (emerald rockcod): 117473781
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Entry
117473781 CDS
T09643
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben02010
ABC transporters
tben04145
Phagosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117473781 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117473781 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117473781 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117473781 (tap2t)
Enzymes [BR:
tben01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
117473781 (tap2t)
Transporters [BR:
tben02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117473781 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA_30
SMC_N
DUF6659
RsgA_GTPase
AAA_15
NTPase_1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
117473781
NCBI-ProteinID:
XP_033975544
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MDQIQPLAVWKMKELAACGLVILLFDTALCLALWAVLVLLSCSSWGGLPGVWAFGAAKWA
VLHVFTSKLTDGKPEGVLRRLVALLCLLSPVFESGRILMAPPSQPNTGPSPDLSMLLLGP
LSSLLACVVWEKSLCGDSKTKKDNIDLDARRLLVRVLKYFKPDTLYLIAAFSFLILGVVC
DTYIPLYQGNVIDMLGGQNHQTSVGYAIGQLAFVSLGSALFSGMRGGIFMCTLARLNKRL
KHLLFHTLLQQEVHFFEENNPGRLSSRLHSDVDRMGRTVALNSNALVRSTVKTVLMFRVM
LGLSWELTLLTSIEMPLLAFLQNKYITWSKDLKDQIQECHAQNKDLAFQTISGIRTVRSF
RAEKDELRRYNEALDVMCAVKRSTGIYSAVFLLIRRVVSLGIKILMLVQARSLISSGDLT
IGSLVSFFLYQKPMSNNLKEIMYCYGETMSTVGVISKVFSYIDRTPKCKKEGELAPERLE
GRIVFQNVTFKYPSSPDVEPTLKKVSMELKPGKMTALVGPSGGGKTSCVSLLKRLYEPEE
GQILLDGQPLHHYNHKYFHQKMALVSQDPVLFSGSLRYNIEYGLNDCTLERVKEAAKKAN
ADHFISELKNKYDTDIGECGGKLSDGQKQSLAIIRALVREPQVIILDEATSKLDVDVQHT
VLQEVLTCGRTVLVVAHQLKTVEKADHIIFIEKGAVVEEGTHEQLMAKEGHYYRWKEELF
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatcagattcagcctcttgcagtttggaaaatgaaggaattggcagcatgtggattg
gtcattctcctgttcgacacggctctgtgtctggctctgtgggccgtgctggtgctgctg
agctgctccagttggggtggcctgccaggcgtgtgggcctttggggcggcaaagtgggcc
gttctccatgttttcacctcaaaactgactgatggaaagccagagggcgtgctccgcagg
ttagtggctctcctctgccttctctctcctgtgtttgaaagtggacggatcctcatggcg
cccccctcacagcctaacactggaccatctcctgacctcagcatgctgctcctgggcccc
ttgtcctcgttgctggcctgtgtggtttgggagaagagcctctgtggtgattcaaagact
aaaaaggacaacattgacctggatgccaggcggctgcttgtcagggtgctgaaatacttc
aaaccagacaccctttacctgattgcagctttcagtttcctcatcttaggagtcgtctgt
gatacatatatcccattatatcaggggaatgtcatcgatatgctaggaggtcaaaatcat
caaaccagcgttggttatgcaattggacagctggcctttgtctcgcttggaagtgctctg
ttctccggcatgagaggaggcatatttatgtgcactctggccagactcaacaagagactg
aagcatctgctgttccacaccctgctgcagcaggaggtgcacttctttgaggagaacaac
cctggacgtctgtcctcccgcctgcactctgacgtggacaggatgggccgcacggtcgca
ctgaactccaacgctctggtccgcagcacagtcaaaaccgttctcatgttcagagtgatg
ttgggcctgtcctgggagctcacattgctcaccagtatagagatgcctctgctggccttc
ctgcagaacaaatacatcacctggtccaaggacctgaaagaccagatccaggagtgccac
gctcagaacaaagacctggctttccagacaatcagcgggattcgcacggtccgcagcttc
agggcggagaaagacgagctgaggaggtacaatgaggctctggacgtgatgtgcgccgtg
aagagaagtacaggaatctacagcgcagtcttcctgttgatacggagggtggtgagtctg
ggaataaagatactcatgctggtacaggcccgcagcctcatatcgtcaggtgacctcact
attggaagtcttgtgtccttcttcctgtaccagaagcccatgtcaaacaatttaaaggag
atcatgtattgctatggagagacgatgtccacagtcggagtcatctccaaagtgttcagt
tatattgaccgaacaccaaagtgtaagaaggagggagagttagctcctgagaggctggag
ggaagaattgttttccaaaatgtgaccttcaaatatccctcatctcctgacgtggaacca
actctgaagaaagtttctatggagcttaagccaggtaagatgacagctctggtgggtccc
tctggaggcgggaagacttcctgtgtcagcctcctgaagaggctgtacgaacctgaagag
gggcagatcctgctggacggacaacctctgcatcattacaatcacaaatacttccatcaa
aagatggccctggtatcccaggatcccgtgctgttttctggttctctgaggtacaacatt
gagtacggcctgaatgactgcaccttagagagggtgaaggaagctgcaaagaaggccaac
gcagaccacttcatctctgaactcaagaacaaatatgacacagatataggggaatgtggt
ggtaagctgtcagacggacagaagcagagcctggccatcatcagagctctggtccgggag
ccgcaggtcatcatactggacgaggccaccagcaaactggatgttgatgtgcagcatact
gtgctgcaggaggttctgacctgcggtcggactgtcctggtggtggctcatcagctgaag
actgtggagaaggcagatcacatcatcttcatcgagaagggagccgtagtagaagaaggg
acccacgaacaactcatggccaaagaagggcactactatcgttggaaagaggaactgttc
tcttaa
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