Trematomus bernacchii (emerald rockcod): 117473791
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Entry
117473791 CDS
T09643
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117473791
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117473791
Ion channels [BR:
tben04040
]
Ligand-gated channels
Serotonin (5-HT3)
117473791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117473791
NCBI-ProteinID:
XP_033975558
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MFTGFLFLLLLTAVYFFLSGGSTNNNSKDDNNNGGSSWNTTELQDDLKSNHSFEASGETF
NNSEQQELIGQRSHKDKDNDHSKKSAFPYEDVLNCLNLTENKDKLVRPAKHFKKPTWVYL
QMAIMAILDVKEVDQTFISFAVIYMKWEDPHIYWKPQNFGGLDKMRVPADLLWKPDLMIE
EMIEKDKAVPNPFITIHSNGFVEHVRDLMVVSTCKMQIYKFPFDIQSCTLSLKSIVYPEE
ELRFEVIDDSTLITEWTRQMMRNESEWFLIDITVKDKSVSRCFEKQSVLIYTIRMKRHSA
IYIANFLVPILFFFCLDLASFLMSDSEREKVSFKVTVLLAVTVMQLILNDILPSSSNRIP
LIAVYWIGMFGLMMVSLLETMLVMYLIEKDSASKEKKADKNRSLNVKKWTHCACVCNVSD
EPPSELLSVTKEDKRSQLMEESNSLEKLPDELSEAVKALSLLLSRKEERKPDYWTRVAKK
LNIIFFFVYVTVSALFLGVIFSLWIHANDE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccggtttcctctttctgctcctcctcacagctgtatacttttttctgtcaggt
ggaagtaccaacaataactcaaaggacgacaataacaacggtggaagttcctggaatacc
acagagcttcaggatgatcttaaatcaaatcacagctttgaagcaagtggagaaacattc
aataactcggaacaacaagagcttattggccaacgctcccataaggataaggacaatgat
cacagtaagaaaagtgcattcccctatgaagatgttttaaactgcctgaacctaaccgaa
aacaaggacaagttggtccgacctgccaaacacttcaaaaaaccaacatgggtctatctc
caaatggcaattatggcaattctagatgtgaaagaggttgaccagactttcatttctttc
gctgtgatttatatgaaatgggaagatccacatatttattggaaaccacaaaactttggt
ggccttgataagatgagagtgcctgctgatttgttgtggaagccagatctcatgattgaa
gagatgatagagaaggacaaggctgttccaaatcccttcatcaccattcactcaaacggc
ttcgttgaacatgtgagggaccttatggtggtcagcacgtgcaagatgcaaatttacaaa
tttccttttgatattcagagctgcacattgtctctcaagtctatcgtttacccagaggag
gagttgaggtttgaagtcatagacgacagtacactgataacggaatggactcgccaaatg
atgaggaacgagtctgagtggtttctcatcgacattacagtcaaggacaaatctgtctca
cgttgttttgaaaagcaaagcgttctaatttatactatcaggatgaagaggcattctgcc
atctacatcgccaacttcttagtgcccatcctgttcttcttctgtctggacttggcctcc
ttcctgatgtcggacagtgagagggagaaggtcagcttcaaggtcactgttctgctcgct
gtcactgtgatgcagcttattctcaacgacattctgccttcctcttcaaacaggataccg
cttatagcggtgtactggattgggatgtttggtttgatgatggtcagccttctggagacg
atgttggtgatgtatctgattgagaaagactctgcatctaaagaaaaaaaggcagataaa
aaccgcagcctgaatgtgaagaaatggactcactgtgcttgtgtgtgtaatgtgtctgat
gaaccgccatctgaactgctgtctgtgaccaaagaggacaaaagaagccaactgatggag
gagtccaattccttggagaagctcccagatgagctgagtgaggcggtgaaagcactctct
ctgctcctcagcaggaaggaagaaaggaagcctgactactggaccagggtggctaaaaaa
ttgaacataattttcttttttgtctatgtcacagtgtccgctctgtttttgggtgtcatc
ttttcattatggatccatgcaaacgacgagtag
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