Trematomus bernacchii (emerald rockcod): 117473818
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Entry
117473818 CDS
T09643
Symbol
pax2b
Name
(RefSeq) LOW QUALITY PROTEIN: paired box protein Pax-2b
KO
K15608
paired box protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117473818 (pax2b)
04131 Membrane trafficking [BR:
tben04131
]
117473818 (pax2b)
03036 Chromosome and associated proteins [BR:
tben03036
]
117473818 (pax2b)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117473818 (pax2b)
Membrane trafficking [BR:
tben04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117473818 (pax2b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117473818 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
117473818
NCBI-ProteinID:
XP_033975605
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MDIHCKADPFTAMHWHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAE
GVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGSSLTPGHTIVPSQASPPVTSASNDPAGS
YSINGILGIPRSNGEKRKRDEDGSDGSGPHSDSQGSVESLRKHLRADAFTQQQLEALDRV
FERPSYPDHFPTSEHIKPEQANEYSLPGLNSRLDEVKPSLSSSVNPDLGPSVSQSYPVGR
DMSNTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTSYNDAWRFSNPAL
LMPHPEAPPLPLLPLPMTVTSYHGNQINLQDHGLSLHIAPV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagatcccttcaccgcgatgcactggcacgggggtgtgaac
cagctcggcggggtgtttgtgaacggcagacccctcccggacgtggtgcggcagcggatc
gtggagctggcccaccagggggttcggccctgcgacatctccagacagctgcgggtcagc
cacggctgcgtcagcaagatcctgggcaggtattacgagactggcagcatcaaacccggt
gtgattggtgggtctaaacctaaagtggccactccaaaagtggtggacaaaatcgcagac
tacaagagacaaaaccccaccatgtttgcttgggagatcagagacagactgctggcggag
ggcgtctgcgacaacgacacagtgcccagcgtctcatccattaacaggatcatccgaaca
aaagtccagcagcctttccatccgtctcctgatgggtcgtccctgacgccaggccatact
atagtaccaagccaagcctctccgcctgtaaccagcgcctccaacgacccagcgggatca
tactccatcaacgggattctgggtatcccccgatccaacggcgaaaagaggaaaagagat
gaagatggttcagatggttctggcccacacagtgattctcagggtagtgtggagagttta
cggaaacaccttagggcagatgccttcacccagcagcagctggaagcgctggaccgggtc
tttgaacgcccctcgtaccctgaccacttccctacatcggagcacatcaaacccgaacag
gctaatgagtactcgctccctggcctgaattccaggctggacgaagtcaagcccagttta
tcctctagcgtcaacccagacctgggccccagcgtgtcgcaaagctaccccgtaggtcga
gatatgtccaacacaaccctacctgggtaccccccccacgttccccccacgggccagggc
agctatccgacctccacgctcgccggaatggttcctgggagtgagttttcggggaacccc
tacagtcacccacagtacacatcctacaatgacgcctggcgattcagtaacccagcatta
ctaatgccgcatccagaggctccgcccctcccactgctgccactgcctatgaccgtcact
agttaccatgggaaccaaatcaacctgcaggaccatggccttagcctccatattgccccg
gtgtga
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