Trematomus bernacchii (emerald rockcod): 117473821
Help
Entry
117473821 CDS
T09643
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117473821 (stub1)
04120 Ubiquitin mediated proteolysis
117473821 (stub1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tben03110
]
117473821 (stub1)
04131 Membrane trafficking [BR:
tben04131
]
117473821 (stub1)
04121 Ubiquitin system [BR:
tben04121
]
117473821 (stub1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117473821 (stub1)
Chaperones and folding catalysts [BR:
tben03110
]
Other chaperones and cochaperones
Others
117473821 (stub1)
Membrane trafficking [BR:
tben04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117473821 (stub1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
U-box type E3
117473821 (stub1)
Multi subunit type E3
STUB1-CHIC2 complex
117473821 (stub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_11
TPR_16
TPR_12
TPR_17
TPR_BSK1_C
TPR_19
TPR_14
ARM_TT21_C
TPR_9
TPR_7
TPR_CcmH_CycH
RdRP_head
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
117473821
NCBI-ProteinID:
XP_033975609
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MAGSPEKSSTAQELKEQGNRLFLCRKYQEAATCYSKAINRNPSVAVYYTNRALCHVKLQQ
HDKALADCKHALELDSQSVKAHFFLGQCHLELENYDEAIGNLQKAYNLAKEQRLNFGDDI
PSALRIAKKKRWNNIEEKRINQENELHAYLTKLIIADKERELEEYKEKQDDNQNGGDIAK
ISTKNDKYLMDMEELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEE
HLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcccggagaagagttcaaccgcgcaggagctgaaggagcaggggaaccgg
ctattcctctgccgcaagtaccaggaggctgctacgtgttacagcaaggctattaaccgt
aatccatcggtggcagtgtactacaccaacagggctctgtgccatgtgaagctgcagcag
catgacaaggctctggctgactgtaagcatgcgctggagctggacagccagtcagtgaag
gctcacttcttcctgggccagtgtcacctggagctggagaactacgacgaggccatcggc
aacctgcagaaagcttataacctggcaaaagaacagaggctgaatttcggagatgacatt
cccagcgccttgcgcattgcgaagaagaaacgttggaataacatcgaggagaagcgcatc
aaccaggagaacgagctacatgcctatctgaccaaactcataatcgctgataaagaaaga
gaacttgaagaatacaaagagaaacaggacgacaatcaaaatggaggcgatattgccaag
atttcaacaaaaaatgacaagtatctaatggacatggaggagctcttctctcaagtggac
gagaaaagaaaaaagcgggagatcccagattacctgtgtgggaagatcagctttgagctg
atgagggaaccctgcatcacacccagtgggatcacttatgatcgcaaggacattgaagag
cacctacagcgggtgggtcacttcgacccggtcaccaggagccccctgacccaggaccag
ctgatcccaaacctggccatgaaggaggtgatcgatgcctttatccaggagaacggctgg
gtggaggactactaa
DBGET
integrated database retrieval system
