Trematomus bernacchii (emerald rockcod): 117473846
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Entry
117473846 CDS
T09643
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117473846 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117473846 (smarcd2)
03036 Chromosome and associated proteins [BR:
tben03036
]
117473846 (smarcd2)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117473846 (smarcd2)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117473846 (smarcd2)
PBAF complex
117473846 (smarcd2)
GBAF(ncBAF) complex
117473846 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
117473846
NCBI-ProteinID:
XP_033975665
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASRGGGGFTPMGLSPMNVGHAAGMRMPGMPQPPGGYSRSMNNAPQYPQRPGMPSNRVGG
PMGSMGGQLPGPSYGSGNMSMRQGMGPPGMDASRKRFLHMHQQQQQQQQQQQQQQQQQQE
ALGGMRRGPKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKK
PIMQKRKLRIYISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVI
ELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLA
RLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEFINCNRYFRQIFGCPRMKFSEIPMKLA
GLLQHPDPIIVNHMISVDSTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEI
KIHETIEYINQLKTERDFMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRTEFY
EGPWLPEAVGRYVYSKVQQRRQDLEQVLGIRLA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaggaggagggttcaccccgatgggtctgagccccatgaatgtgggg
catgctgcgggcatgaggatgccaggtatgccccaacctccggggggatactcccggagc
atgaacaacgctccccagtacccacagcgcccagggatgccatctaacagagttgggggc
ccaatgggatcaatggggggtcagctgcctggcccttcttacggcagtgggaacatgtcc
atgcggcaaggcatggggcctccaggcatggacgcttccagaaaacgctttcttcatatg
catcaacaacaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcaagag
gcgctgggaggcatgagacgagggccaaagagacgaaagatggccgacaaggttctccca
cagaggatcagagacctggtcccagagtcccaggcctacatggatctcttggcctttgag
aggaaactggaccagaccatcgctcgaaagcgtatggagatccaggaagccatcaagaag
cccatcatgcaaaaacgcaagctcaggatctacatttccaacacgtacacccccagtaag
ccggagggcgaggaggcagagaaggtgtcctcctgggaactgagagtggagggaaaactt
ctggaggaacctggcaagcagaagaggaagttctcatctttcttcaaaagcctggtgatt
gagcttgataaggagctctatggacccgacaaccacctagtagagtggcacagaatgccc
accactcaggagacggatggtttccaggtcaaaaggcccggtgatgtgaatgtgaaatgc
accctgctgctcatgctcgaccaccagccccctcagtacaaactggacccccggttggct
cgtctgctcggtgttcacacacagacgagagccagcatcatgcaggccctttggctctac
atcaagaacaacaagctgcaggactgtcatgagaaggagttcatcaactgcaaccgctac
ttcagacagatcttcggctgtcctcgcatgaagttctctgagattcccatgaaactggca
ggcctgctgcagcaccctgaccccatcatcgtcaatcacatgattagtgtggactccacc
gatcagaagaagacggcgtgctatgacattgatgtggaggtggatgaccctctgaagggc
caaatgaacagtttcctgtcctctacaacaaaccaacaggaaattgctgcgctggaaatt
aagattcatgagacgattgagtacatcaaccagctgaagactgagagagacttcatgctg
agcttcagcaataaacctcaggacttcatccaagactggctcaagtctcagtgcagagat
ctgaagttgatgactgatgtgacaggaaacccagaggaggagaggaggactgagttctac
gaggggccctggttaccagaggctgtgggcagatacgtctactccaaggtgcagcagaga
agacaagacttggagcaggtgttgggaatccgtctcgcctaa
DBGET
integrated database retrieval system
