Trematomus bernacchii (emerald rockcod): 117473863
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Entry
117473863 CDS
T09643
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04144
Endocytosis
tben04145
Phagosome
tben04148
Efferocytosis
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117473863
04145 Phagosome
117473863
04137 Mitophagy - animal
117473863
04148 Efferocytosis
117473863
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117473863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473863
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117473863
04031 GTP-binding proteins [BR:
tben04031
]
117473863
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117473863
Endosome - Lysosome transport
117473863
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117473863
Exosomal proteins of other body fluids (saliva and urine)
117473863
Exosomal proteins of colorectal cancer cells
117473863
Exosomal proteins of bladder cancer cells
117473863
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117473863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
DUF1327
DUF2624
Motif
Other DBs
NCBI-GeneID:
117473863
NCBI-ProteinID:
XP_033975687
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MAGRGGGSTRPNGAAAASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVDLQEAQTYAEDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKSDPQGAGAGGRTRTGVDLQESAPQSRSSQCCGGGNSGN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcgtggtggaggatcgaccaggccaaatggtgctgccgcagcaagcaaaatc
tgccaattcaaactggtgctgctcggggagtcagccgtgggcaagtccagcttagtgctg
cgcttcgtcaaaggccagtttcatgaattccaggaaagcaccattggagccgccttcctc
actcagaccgtctgtctggacgacaccactgtgaagtttgagatctgggacacagccggt
caggagcgctaccacagtctggctccaatgtattacagaggcgcgcaggcagccatcgtg
gtctacgacatcaccaacacagatacatttacaagagcaaagaactgggtgaaggagctg
cagagacaagccagccccaacatagtgatcgctctggctggaaacaaggccgacatcgca
aacaagagagccgtagaccttcaggaggctcaaacatacgctgaggacaacagtctgctg
ttcatggagacctcagctaagactgccatgaacgtcaatgaaattttcatggctattgca
aagaagctcccgaagagcgacccccagggagctggagcgggggggcggaccaggacagga
gtggatctacaggagtctgcgcctcagagccgcagcagccagtgctgcggggggggcaac
agtggcaattag
DBGET
integrated database retrieval system