Trematomus bernacchii (emerald rockcod): 117473870 Help Entry 117473870         CDS       T09643                                  Name (RefSeq) DNA repair endonuclease XPF-like   KO K10848   DNA excision repair protein ERCC-4 [EC:3.1.-.-] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben03420   Nucleotide excision repair tben03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:tben00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     117473870    03460 Fanconi anemia pathway     117473870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tben03032]     117473870    03400 DNA repair and recombination proteins [BR:tben03400]     117473870 DNA replication proteins [BR:tben03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     117473870 DNA repair and recombination proteins [BR:tben03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      117473870 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ERCC4 HHH_5 Motif Other DBs NCBI-GeneID:  117473870 NCBI-ProteinID:  XP_033975696 LinkDB All DBs Position Unknown AA seq 889 aa AA seqDB search MAGPLLEFETEMFLSLFEVDGLLVAAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQE YFTEQLRAEGVTHLPRTVTSDVQSAERYNVYTEGGVLFVTSRILVVDFLTDRVPAHLISG ILVYRAHTIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL YLWPRFQASVNTALDRHKPEVVELNVSLTPAMRAIQSSILDIMSACLKELKRYNPSLEAE DLSLENTLGNAFEKTIRHYLDPLWHQLGSKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL ESLRSSQKNFGSNSGWLFLDSSTSMFMNTRGRVYRYPESKKKVKLGVEAEKPKPSSEVKR QLVLEKSPKWEALTEVLQEIEKENKSSEHEPGRVLICASDDRTCAQLQQYIRLGSDSLLH RLYARTVGKSDAAAAAALDLDCHKKGNSWPKKGAKGKEPAQKKPTKSKKRPSLTLTQMVG KDEAEEAEMMGSSGDEDEDEEEEQMKLDLSSDAYYGVLKEPLTVIHPLKGLTDPHSLTRV LHEVEPSFVVLYDAEISFVRQLEIYKASRPGKTLRVYFLIYGGSTEEQKYLTALSREKRA FEHLIREKATMVIPEEREGRADTNLDLARNLEPANATTNTRKAGGQEQPKEPSRVIVDMR EFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQSGRLYTQCLSMT RYYKRPVLLIEFDPAKPFSLMARSDFRHEISANDISSKLTLLTLHFPRLRILWCPSPHAT AELFEDLKKGRLEPDGAAAQAITAESDMVAESADLYNPGPYDFLLKMPGVNMKNYRALVK NADSLADLAQLSQERLAEILENAKNAKQLFEFLHNDADVPAPVQKGKWT NT seq 2670 nt NT seq  +upstreamnt  +downstreamnt atggcgggtccgctgctggagtttgagacggagatgttcctcagtctgtttgaggttgac gggctgctggtggcggcggagggcatggggatagaccgcatcctgctgcagttcatgcgg gtttactccgagcagggcagcctggtcctgctgctgaacaccaccacacctgagcaggag tatttcacagagcagctgcgagcggagggtgtgacccacctgccgaggacggtgaccagc gacgtgcagagcgctgagagatacaacgtgtacaccgaggggggggtgctgttcgtcacc agcaggatcctggtggtcgacttcctcaccgaccgcgtccccgctcatctgatctcaggc atcctggtgtatcgtgctcatacaatcatcgagtcgtgtcaggaggccttcatcctccgt ttgttcagacagaagaacaagacgggcttcattaaagcgttcactgacaaggccacgtcc ttctcctccggattctgccaggtggagcgtgtgatgaggaacctcttcgtcaagaagctc tacctgtggcccaggtttcaagcgtcagtgaacacagcgctggacagacacaagccggag gtggtagagctcaacgtgtctctgactccggccatgagggccatccagagctccatcctg gacatcatgagcgcctgcctgaaggagctgaagcgctacaaccccagcctggaggccgag gacctctccctggagaacacgctgggaaacgccttcgaaaagacgatccgtcactacctg gaccccctgtggcaccagcttggctcaaagaccaaggctctggtccaggacctgaaggtg ctgagggtgctgctgctctacctcacccagtacgactgcgtcaccttcctcaatctgctc gagtctctgcgctccagccagaagaactttggatccaactcagggtggttattcctcgac tccagtacctccatgtttatgaacaccaggggaagagtgtaccgctacccagagagcaag aagaaagtcaaactgggagtggaggcagagaaaccaaagccatcctcagaggtgaaacgg caactggtgctggagaagagcccgaagtgggaggctctgaccgaagtactgcaggagatc gagaaggagaacaagagctctgaacatgaaccaggtcgggttctgatctgtgccagtgat gaccggacctgtgcccagctgcagcagtacatccggctcggctccgactcgctgctccac cgcctctacgcccgcaccgtcggcaaaagtgacgccgctgcagccgccgccctcgatctc gattgccacaaaaagggcaacagctggccgaaaaaaggagccaagggaaaagagccggcg cagaaaaaacccacaaagagtaaaaaaagaccctcgctgactctgacccagatggtgggg aaagacgaggcggaggaggcggagatgatgggcagcagtggagacgaggacgaggatgag gaggaggaacagatgaagctggatttgtcatcagatgcttattatggagttctgaaggag ccgctgactgtcatccaccctctgaagggcctcactgacccccacagcctcaccagggtg ctgcacgaggtggagcccagcttcgtggtgctgtacgacgctgagatcagtttcgtccgc cagttggagatctacaaagctagccggcccgggaaaacactgagggtgtatttcctcatc tacggaggctccacggaggaacagaagtacctgacggcgctgtccagggaaaagagagcc ttcgaacacctcatcagagaaaaggctaccatggtgatcccagaggagagggaggggcgg gcagacactaacctggacctggcaaggaatttagagcctgcaaacgccaccaccaacacc cgcaaagcaggaggtcaggagcagcccaaagagccgtcccgagtcatcgttgacatgcgt gagtttcgcagtgagctgccctcgttgctgcaccgccgcgggctggacatcgagcccgtc accctggaagtgggcgactacatcctgaccccggacacgtgcgtcgagcggaagagcgtc agtgatctgattggctccctgcagagcggccgcctctacactcagtgtctctccatgact cgatactacaaaagacctgtgctgctcattgagtttgacccagcaaaacccttttccttg atggcacgctcagatttccgtcatgagatatcggccaatgacatttcttccaaactcacc ttactcactttgcatttccctcggctccgtattctctggtgcccgtccccccacgccact gccgagctcttcgaggatctgaagaaaggtcgcctggagccggatggtgccgccgctcag gccatcacagccgagtcagacatggtggccgaatcagctgacctctacaaccccgggccg tatgacttcctgttgaaaatgcctggggtcaatatgaaaaactacagggctcttgtgaaa aacgcagacagcctggcagatttagcccaactcagccaggaaaggttggcagaaatactg gagaatgctaaaaatgctaagcagctgtttgagtttctgcataatgatgctgatgtccct gctcctgtgcagaagggcaagtggacatga

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