Trematomus bernacchii (emerald rockcod): 117473874
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Entry
117473874 CDS
T09643
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117473874 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117473874 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117473874 (chad)
Proteoglycans [BR:
tben00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
117473874 (chad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
117473874
NCBI-ProteinID:
XP_033975711
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MRCVSWLLFGTSILVLGLAVQGAPGQCPNLCHCHGELQHVICDSVGLKKIPRVSEVTRLL
NLQRNSLGSIPTGSFTDSRGLISLHMQQCQLREIGSQAFKGLKKLIYLYLSNNQISSLKP
GAFDDLTALTYLYLDGNQISDLAKGVFSPMINLFILQLDDNRLRELRPGTFTGAKDLRWL
HMSGNELTTLQPGSLDEVENLAIFHLERNRLSTYPIAAMSKLRVVEELKLGKNPMRTIPN
IAFQSFGRYMEKLHLDNMGLEKFSDGAFTGVTAIKTLNLDNNKLKFLPKSLNFSSIAITN
LTLTNNPWGCTCQLAPLRRWMDSSRNRLEAVCASPPQQKGKQVRDSTALSGCKVKSKKNK
KGRQQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgtgagctggttgctgtttgggacctccatcctggtcctgggcctggcggtg
cagggagccccgggccagtgcccaaacctgtgccactgccacggggaacttcagcacgtg
atctgtgacagcgtggggctgaagaagatcccccgggtgtctgaggtcacccgcctgctg
aacctgcagaggaacagcctgggcagcatccccacggggtccttcaccgacagcaggggc
ctcatctctctgcacatgcagcaatgccagctgagggagatcgggtcccaggccttcaag
gggctgaagaagctcatctacctctacctgtccaacaaccagatcagcagcctcaagccc
ggcgccttcgatgacctgacggcgctcacctacctctacctggatgggaatcagatcagc
gacctcgccaagggcgtcttctcccccatgatcaacctcttcatcctgcagctggacgac
aaccggctccgggagctgcggccggggacctttacgggggccaaagacctgcgctggctg
cacatgagcgggaacgagctgaccacgctgcagccaggctctctggacgaggtggagaat
ctggctatattccacctggagaggaacaggctgtccacctatcccatcgcggcgatgagc
aaactgcgggtggtggaggaactgaagctggggaagaaccccatgaggaccatcccaaac
atcgccttccagagctttgggcgctacatggagaagctacatctggacaacatggggctg
gagaagttctctgacggtgcgttcactggtgtgactgcaatcaagacactgaacctggat
aacaacaagctaaagttccttcccaaaagcctgaatttcagcagcatcgccatcaccaac
ctgaccctcactaacaacccgtggggctgcacgtgccagctagctccattgcggaggtgg
atggactctagtcgcaatcgtctagaagcagtgtgtgcatctccccctcagcagaaagga
aagcaagtgagagacagcaccgccttgagtggctgcaaagtcaagtcaaagaaaaacaaa
aagggccgacagcagtag
DBGET
integrated database retrieval system