Trematomus bernacchii (emerald rockcod): 117473882
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Entry
117473882 CDS
T09643
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117473882 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117473882 (gspt1)
03012 Translation factors [BR:
tben03012
]
117473882 (gspt1)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117473882 (gspt1)
Translation factors [BR:
tben03012
]
Eukaryotic type
Release factors
117473882 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
117473882
NCBI-ProteinID:
XP_033975722
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDPRDTAPDSWELEEEDAEAQAVAADLQASFAALNVNAKPFVPNVNAAVFVPSFFQASPA
ETPVPVAAPDPVANMEVAETAGMKPHCSVAAPVENGSSEAKMTTEEETWEQKEEPGGGGG
GGGGGGGGEGGEGGGGEEDLVPGGACEEGAARIEEEEMMEEEEEEMPMPKVAPAPPNAPK
KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQ
EERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFE
TGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLDRYEECKEKLVPFLKKVGFN
PKKDIYFMPCSGLTGANLKDPLTECLWYTGMPFISHLDSLPNFTRSNDGPVRLPIVDKYK
DMGTVILGKLESGCISKAQQLIMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEE
EEILPGFILCSPDNICHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICL
VDKKSGEKSKVRPRFVKQDQVCIARLRAAGTICLETFKDFPQMGRFTLRDEGKTIAIGKV
LKLVPEKD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcatgggagctggaggaggaggatgccgaggcc
caggctgttgctgcggatcttcaggcctcatttgccgcccttaacgttaatgccaagccg
tttgtccccaacgtgaacgccgcggtgtttgtgccgagcttctttcaagcaagccccgca
gagacaccagtgccagtcgcggcccctgatccagtagccaacatggaggtggcagaaaca
gccggtatgaagcctcactgttcagttgcagctccggtggagaacggaagctcagaggcc
aagatgaccacagaggaggagacgtgggagcagaaggaggagcctggaggaggaggagga
ggaggtggtggtggtggtggtggagaagggggagaaggaggaggaggagaggaagatctg
gtaccaggaggagcctgcgaagagggagcagccaggatcgaagaagaggagatgatggag
gaggaagaggaggagatgccgatgcccaaagtggctccggcaccaccaaatgccccaaag
aaggagcatgtgaacgtggtcttcatcggtcacgtggatgctggaaaatcaactatcgga
ggacagatcatgtacttaactggaatggtggaaaagcgaaccctggagaaatatgaaaga
gaggcgaaagagaagaacagggagacatggtacctgtcgtgggctctggacacaaaccag
gaggagagagacaaggggaagacggtggaggtggggagggcttactttgagacggagaaa
aaacatttcaccatcctggacgcccccggacacaagagcttcgtccccaacatgatcggg
ggggcgtcacaagccgacctggctgtgctggtgatttcggcgaggaagggggagtttgag
acgggctttgagaagggggggcagacacgggaacatgccatgctcgctaaaacggccggg
gtcaaacatctcatcgtcctggtgaacaagatggacgaccccacggtcaactggagcctc
gacaggtatgaagagtgtaaggagaagctggttccctttctaaagaaggtgggcttcaac
cccaagaaggacatctactttatgccttgctccggactcacaggtgccaacctcaaagac
cccctcacagaatgcctctggtacacggggatgccatttatttcccacctggacagtttg
ccaaacttcaccagatccaacgacggaccggtgagactacccatcgtagacaagtacaag
gacatgggcacagtgatcctggggaagctggagtcggggtgcatcagtaaagcgcagcag
ctcatcatgatgcccaacaggcacacagtggaggtcctgagtctgctgagtgacgatgtg
gagacggacgatgcgactcccggggagaatctgaagctgaggctgaagggcatcgaggag
gaggagatcctgccggggttcatcctctgcagccccgacaacatctgccactccggacgc
accttcgacgcacagatcgtcatcattgagcacaagtcaatcatttgtcccggttacaac
gcagtccttcacatccacacctgcatcgaggaagtgcagatctcagccttaatctgtctg
gtggataagaagtcgggggagaaaagcaaagtccgaccgcgcttcgtgaagcaggaccag
gtgtgcatcgcccggctgagagcggcaggaaccatctgcttagagaccttcaaagacttc
cctcagatgggacggttcacactgagggacgagggtaaaaccatcgccatcggcaaagtg
ctgaagctggtcccagagaaggactaa
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