Trematomus bernacchii (emerald rockcod): 117473956
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Entry
117473956 CDS
T09643
Symbol
sdk2b
Name
(RefSeq) protein sidekick-2 isoform X1
KO
K16353
protein sidekick
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117473956 (sdk2b)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Other
117473956 (sdk2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_Rha78A_N
Ig_C17orf99
Ig_J_second
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
117473956
NCBI-ProteinID:
XP_033975814
LinkDB
All DBs
Position
Unknown
AA seq
2273 aa
AA seq
DB search
MFEDSWSRSMWRATWILFSSLIIHSTQAQDDVPPYFKTEPVRSQLHLERNRLVLTCMAEG
SWPLEFKWIHNNTELTRFSLEYRYLIPSLDRSHAGLYRCIVRNRVGALLQRRTEVQVAFM
GSFEEGERSQSVSQGEGAVVHAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILS
TVAPDAGRYYVQAVNDKNGENKTSQPITLSVENVGGPADPIAPTIIIPPRNTSVVTGTSE
VTMECVANARPLIKLSITWRKNGVLVTSGLSDFNRRLTIINPLVGDAGFYECEAILRSSS
VPSVSGGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDAFPINPV
KMPRYRVLVGGSLQVNGLLPDDTGMFQCFARNLAGEVQTNTYLAVTSIAPNITAGPSDST
VIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGT
YTCMASNSRGIDEASADLVVLARTRITTPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWE
KEGSVVNVQSIPRMRLEADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHA
PENPTAVLSASEKRAIDLAWAKPFDGNSPLIRYILEVSENNAPWAILLANIEPESTAVTV
NGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPTQNVIASGRTNQSIMIQWQ
PPPESHQNGILRGYTVRYRLTGLPVDYQIKNITSPEVTNLLLEDLIIWTNYEIEVAAYNG
AGLGTFSHKVTEWTLQGVPTIAPGNVQAEPVNSTTIRFTWTAPNPQFINGINQGYKLLAW
EPGRDDDVTMVTVRPNFQDSVHVGYVTGLKKFTEYYSSVLCFTTPGDGPRSLPKALRTHE
DTPGAVGHLSFTEILDTSLKVSWSEPGEKNGVLTGYRISWEEFNRTNTRVTHYLPNVTLE
YRVTGLTALTTYTIEVAGMTSKGQGQLSSSTISSGVPPELPGPPTNVAISNIGPRSVTLQ
FKPGYDGKTSISRWQMEAQVSVVGENEDWVMVHKVSNEPEARSLEVPGLNPYTFYRFRMR
QVNIVGTSLPSQPSRKIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQV
GSRVQYSRAGSQGRALIHIIADRLEREFTIEDLEEWTEYEVRVQAVNGIGTGPWSQPVRG
RTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVVFKEKDSDSAVHFWM
VEGNATHSIQLTGLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPGPPVGILFPEV
RTTSVRLIWQSPSQPNGIILAYQITYHLNSSNSNTPTVDVLIPSARQYTVTSLKPESVYV
FRIKAQTRKGWGDAAEALVVTTEKRARPQPTSRPMVPQKDVQARHVLLSWEPGSDGLSPV
RYYTVQQRELPESNWTVHSASVNHEASSYIVSRLKPFTSYQFRVKATNDIGDSEYSEESE
AITTLQDAPDEAPSILSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYRELLYDRLRSY
SAHTISSLSTWGDLTAPYSIQNLSDSTQTQHQLDKLSKHKRYEIRMSVYNAVGEGPTSTP
QEVFVGEAVPTAPPQSVAIQSATATQLDVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETE
RLRTLFMPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSAPTRGRTQQAAPSAPSFIHFS
ELTTTSVNVSWGEPTFPNGIIEGYRLVYEPCSPVDESSVACVDCLHSPSPPGVSKTVTVD
VKGTGPLWLKLRDLADGITYNFRIRAKTFIYGPEVEANITTGPGEGAPGPPGEPFITRYG
SALTIHWTSGDPGRAPISRYVIEARPSDEGLWDILIKDIPKEVTSHTFNMDILKQGVSYD
FRVIGVNDYGYGSPSLPSPSISAQKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQS
KKYAKKSESVSLYVCPGNNSNCNALTHGDMVSLDEGRFPALELNNRRLSVKNSFCRKNGV
YTRSPPRPSPGSLHYSDEDVSTKYNDLIPAESSSLTEKPSEISDSQEALVFSYGTGGLHT
LPLHLGSDSEYEVDPNRQKTHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESESGDP
DHCAPPPLPPLPPLPPQLSSPSPQPQQAQGQPQGQPQGQPQGQPQGQPQGQPQGPPQVHP
QGQGSLFRPKGSRTPTPSQQSSNPPSQQSTLYRPPSSLAPGSRAPIAGFSSFV
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggactcctggagcagatcgatgtggcgcgccacatggattttattttcctcc
ttaatcatccactccacacaagctcaagatgacgtgcctccctacttcaagacggagccg
gtgcgcagccagctccatctggaacgcaacaggttggttctgacctgtatggctgaggga
agctggccactggagttcaaatggatccacaacaacaccgagctgacccgcttctccctg
gagtacaggtacctgatcccctcattggaccgctcccatgccggcctctaccgttgcatc
gtgaggaatcgtgtgggagccctgctgcagaggcgcacagaagtacaggtggcctttatg
ggcagttttgaggagggggaacgctcccaatccgtctcccagggagagggtgcggtggtc
cacgcgccgcgcattcgcagcttcccccagccccaagtcacctggttcagagatgggcgt
aagattccacccagcagtcgcattgccatcactctggacaacacgctggttattctgtct
acagtggcaccagacgccgggcgctactacgtacaagctgtaaatgacaagaacggagag
aacaagaccagccagcccatcaccttatcagtagagaatgtaggaggtccagcagacccc
attgcccccacaatcatcatccctccaaggaacactagcgtggtcacaggcacctccgag
gtcaccatggagtgtgttgccaacgccaggcctctcatcaagctgagtatcacgtggcgt
aagaacggcgtgttggtgacgagcggtttgagcgacttcaaccgccggctgaccatcatc
aaccccctggtgggcgacgccggcttctacgagtgcgaggccatcctccgcagcagcagc
gtgccttcagtcagcggcggggcttatctgcatgttctggaaccaccgcagtttatcaag
gaaccagagaagcacatcacagctgagatggaaaaggtggtggacattccctgtcaggca
cgaggagtcccccagccagacattgtgtggtacaaggatgcttttcccatcaaccctgtg
aagatgcccaggtacagagtgctggtggggggcagccttcaggtcaacggcctcctgcca
gacgacaccgggatgttccagtgcttcgccaggaacttggcaggagaagttcagaccaac
acctacctcgctgtcaccagcatcgccccgaatatcacagccggaccctcagacagcact
gtgatcgacggcatgtcagtcatcctgcactgcgagacctctggagctccgaggcccgcg
atcacctggcagaaaggtgagcgtgtgttggccagcggctcggtccagctgcccaggttc
accctcctcgagtcaggcagcctcctcatctccccctcacacatctcagatgccgggacc
tacacctgcatggcgagcaactccaggggcatcgatgaggcgtccgctgacctcgtggtc
ttggctcgcacccggattaccacccccccacaggaccaaagtgttatcaaaggaactaaa
gctgttatgacctgtggagtcacacatgacccaagtgtaactgtcaggcatgtctgggag
aaagagggctcagtggtcaacgtccagtccatcccccgcatgcgcctggaggcagacggg
accctccacatctcccagacctggtcaggtgacatcggcacgtacacctgcagagtcacc
tccgttggggggaacgactcccgcagcgctcacctccgagtcaggcagctgccccatgct
ccagagaaccctacagccgtgctgagcgcatcggaaaaaagagccatcgacctggcctgg
gccaagccttttgatggcaacagccccctcattcgctacatcctggaggtttctgagaac
aacgctccctgggccatcctgctggccaacatcgagccagagtccacagcggtgacggtg
aacggtttgatcccggcgcgctcctatcagttccgcctctgtgccgttaatgatgtgggg
aaggggcagttcagcaaggagacagaccgggtctctctcccagaggagccccccagtgct
ccgactcaaaacgtcattgccagcggtcgcaccaatcagtccatcatgatccagtggcag
cccccgcccgaaagccaccagaacggcatcctcaggggctacaccgtccggtaccgtctg
actggacttcctgtggactaccagataaagaacataactagtcctgaggtgactaacctt
ctcctggaggacctaatcatctggaccaactatgagattgaggttgccgcgtacaacggg
gcgggtttgggcactttcagccataaagtcactgagtggactctgcagggagtacccacc
atcgcccccggcaatgtgcaggccgagccggtcaactcgacaactatccgtttcacgtgg
acggcccctaaccctcagttcatcaacggcatcaaccagggctacaagttactggcctgg
gagcccggcagagacgacgatgttactatggtaacagtgcgaccgaacttccaggacagt
gtccatgtgggatatgtgacaggtctcaagaagttcacagagtattacagctctgtgctg
tgtttcaccacgccaggagacggcccccgaagcctgcccaaagcattgaggacacacgag
gacacgcccggtgctgtgggtcacctgagcttcactgagatcctggacacctcgctcaaa
gtcagctggagcgagcccggcgagaagaatggagtcctcacaggttaccgcatttcgtgg
gaggagttcaaccgcaccaacaccagagttacccactacctgcccaatgtcaccttagag
tacagggtcactggactcactgctctcaccacctacaccatagaagtggcagggatgacc
tccaaaggccaaggccagctgtcctcctccaccatctcctccggggtcccaccagagctt
ccgggtcctcctaccaatgtggcaatctccaacatcggcccacgctccgtcaccctgcag
ttcaaaccgggttatgatggcaaaacctccatttcccgttggcagatggaggcccaggtt
tctgtggtgggggagaatgaggactgggtgatggtccacaaagtgtccaatgaacctgag
gctcgctccttggaggtgcctggtctcaacccttacaccttctacaggttccgtatgcgc
caggtgaacattgtcggcaccagtctccccagccagccctccaggaagatccagactctc
cctgccccccctgacatggcccccgccaacgtcaccctgcgcaccgccagcgagaccagc
ctctggttgcgatggatgcctttgcctgaatgggagtacaacgggaacgcagagcaggtg
ggctccagggtccagtactcccgcgcgggctcacagggccgggcgctgatccacatcatc
gcagaccgcctggagagagagttcaccatcgaggacctggaggagtggacggagtacgag
gtcagggtccaggccgtcaacggcatcgggacgggaccctggagccagcccgtcagaggc
aggacgagggagtctgtcccctcctgtggacccaccaacgtttctgccttcgccaccacc
tccagcagcatcctggtgcgctggtttgaagttcccgagccagacagaaatggactcatt
cttggctacaaggtggtgttcaaagagaaagactctgacagtgcggtccacttctggatg
gtggaggggaacgccacccacagcattcagctcaccggtcttgggaaatacgttctgtat
gagatccaggttctggccttcacgcggattggagatggacggcccagttctccacctatc
ctggagaggactttggatgatgtgccaggacctcccgtgggtatcctattccctgaagtg
cggaccacctctgtcaggcttatttggcagtctccctcgcagcccaatggcataatactt
gcctaccagatcacataccacctcaactcctccaacagcaacacacccacagtggacgtg
ctgatccccagtgctcgccagtacactgtgaccagcctcaagccagagtccgtctacgtg
ttccgcatcaaagcgcagacgaggaagggctggggcgacgctgctgaggcgctggtggtc
accacggagaagagagctcgtccccagcccaccagccgccccatggttcctcagaaagac
gtccaggcccgtcacgtcctcctgtcctgggagccgggcagcgacggcctgtcccctgtg
cgttactacaccgtgcagcaaagagagcttcctgagagcaactggaccgtccactctgcc
tccgtcaaccatgaggcctcctcctacatagtatcaaggctgaagcccttcacgtcctac
cagttcagagtaaaagccaccaatgacataggggacagtgagtacagcgaggaaagtgaa
gcaatcacgacactacaggacgcgcctgacgaagcaccctccattctctctgtgacaccg
cacacaacgacgtccgtgctgatccgctggcagcccccctctgaggagaagataaacgga
atcttactgggctttcggattcgatatcgtgagctgctttatgaccgcctgcgcagttac
tctgctcacaccatcagcagtttgtccacctggggcgatctcaccgcaccctacagcatc
cagaacctgagtgattcaactcagacccagcatcagttggacaagctgagtaaacacaag
cgctacgagatacgcatgagtgtttacaacgctgtgggcgaggggccgaccagcacgcca
caggaggtgtttgtgggggaggcagtgcctacagctccgccccagagtgtggccattcag
tctgcaaccgccacccagctggacgtgacgtgggaccctccccccgtggacgcacagaac
ggagacatccagggctacaaggtttacttttgggagttccagcgcaagaacgagacggag
cggctgcggactctgttcatgccggaggggggagtgaagctgaagaacctgactggttac
accacctatatgatcagtgtggcccctttcaacgcagctggggacggaccccgcagcgca
cccacgaggggccgcacccagcaagcagctcccagtgcccccagcttcatccacttcagt
gagctgaccaccacctccgtcaacgtatcctggggcgagcccaccttccctaatggcatc
atcgagggctaccgtctggtctacgaaccctgctcaccggtagatgagtcctcagtggcc
tgtgtcgactgtctccactccccctcccccccaggcgtcagtaagacagtgacagtggat
gtgaaggggaccggccccctatggttgaagctcagagacctggccgacggcatcacctac
aacttccgcatcagagccaagactttcatctacgggcctgaggtggaggccaacatcacc
accggccccggggaaggagccccgggacccccaggagaacccttcatcactcgctacggt
tcggccctgactatccactggaccagcggggacccgggacgtgctcccatcagtcgctac
gtgatcgaggccagaccttcagatgagggcttgtgggatatcctaatcaaggacatcccc
aaggaggtgacatcacacacattcaacatggatatcctgaagcaaggggtcagttacgac
ttcagggtcattggagtgaacgactacgggtacgggtcccccagtctaccttctccttcg
atatctgcccaaaaagtggcgcctttctacgaggagtggtggtttctggtcgtggtggcc
ttggtggggctcatcttcatcctgctgctggtcttcatcctcattatcagaggccagagc
aagaagtacgccaagaagtccgaatcagtgtctctgtacgtgtgtccaggaaacaactcc
aactgtaacgctctgacccacggagacatggtcagtctggacgaaggccgtttccccgct
ctggaactcaacaaccgaaggctgtctgtgaagaactctttctgccggaagaacggcgtc
tacaccaggtctcctcctaggcccagtccaggcagtttacactactcagacgaagacgtc
agcacaaagtacaacgacctgatccccgcagagagcagcagcctgactgagaagccctcc
gaaatctcagactcacaggaggcgctggtgttttcatatgggacaggtggcctacataca
cttccactgcatttgggcagcgacagtgagtacgaggtggaccccaaccgccagaagacc
cactccttcgtcaaccactacatcagcgaccccacctactacaactcctggcgccgccaa
cagaaaggcatctcccgggctcaggcctacagctacaccgagtccgagtcgggggatccg
gaccactgcgcccccccgccactgcctcctctacctccactgcccccccagctcagttcc
cctagcccccagcctcaacaggcccagggccagcctcagggccagcctcagggccagcct
cagggccagccccagggccagccccagggccagccccagggcccgccccaggttcatccc
cagggccaaggcagcctgttcaggcccaaaggtagccggactcccaccccctcccagcag
agctccaacccccccagccagcagagcaccctctacaggccccccagcagcctggcccct
ggctcgcgggccccaatcgctggcttctcttcctttgtgtga
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integrated database retrieval system
