KEGG   Trematomus bernacchii (emerald rockcod): 117473974
Entry
117473974         CDS       T09643                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03020  RNA polymerase
tben04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117473974 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117473974 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117473974 (polr3e)
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     117473974 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 117473974
NCBI-ProteinID: XP_033975843
LinkDB
Position
Unknown
AA seq 690 aa
MASGDDDDPIIEEIDVYLAKSLADKLYLFQYPVRPSNMTYDDVNHLSARIKPKQQKVELE
MAMDTNSPNYCRSKGEQIALNVDGTTYEETNTYSAKIMDKQTFTSIQATTNTSRYAAAVF
RKGELHVTPLSGILQMRPSFTYLDKADTKTREREAANEGGDSSQDEAEEDVKAITVRFAR
PESEQARQRRIQSYDFLQRKQAEEPWAHLHYHGVKDGHSEHERQYLFCQSMDASENSELV
KTPKEYLAMLMPPIAEEKLVKPVGPSNVLSMAQLRTLPLGEQVKTLLKNVKVMPFANLMG
LLASGTDSTAALRCIQQVALLVQGNWVVKSDVLYPKNTCSPHSGVPAEVLCRGRDFVMWR
FTLERSVMRKEIASIIKLPPEDVKEFLEHVAVPRVNRGWEFLLPTDVEFVKKHTDIAHRQ
HMLWLGIQSKLEKVFNFSKEDFMPKNSPQPDPVHVTGEQRLKKAQDRAQGNKSSMQKDRD
TRRSESSVQVKQEPVSDREDEPMDTSSSSSAINGSVNGYPSATSPAFDHTNGNTGSPANA
PSVELKDFVKKTFKKHFVLTLNEFKRLFGLHIASMPSGHSIYPSISDHMLQDAILLCQCK
QIMVPFPAQTTAATDEQKVFGLWETGEEFDKQRRLLYELFNKNYRIRRTMIQAKLTQELG
DACKADIDRMLNECCISHAGMWYLKGTVPS
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggccagcggggatgatgatgacccaattatagaggagattgatgtgtatcttgccaaa
agtcttgcagataagctgtatctttttcagtaccccgtccgaccatccaatatgacctac
gatgatgtcaaccacttatcagctcggatcaaacccaagcagcaaaaggtggagttggaa
atggccatggacacaaatagtccaaactactgtcgcagcaaaggagagcagatagctctg
aatgtggacggcaccacttacgaggaaacaaacacctattctgcgaaaattatggataaa
cagaccttcacctccatccaggccaccaccaacacctccagatacgctgctgctgtgttt
cgcaaaggagagcttcacgtcactcctctgtcgggaatcctgcagatgagaccgagcttc
acttatctggacaaggccgacaccaaaaccagagagagggaggcggccaatgaaggtgga
gactcctcccaggatgaagctgaggaggacgtcaaagccataacggtgaggtttgcgcgt
cccgagtcggagcaggcccggcagaggaggatccagtcgtacgacttcctccagaggaag
caggcggaggagccctgggctcacctgcactaccacggtgtcaaggatgggcactcggag
catgaacggcagtatctgttctgccagtcaatggacgcctcggagaactctgagctggtc
aaaacccccaaggagtacctagcaatgctaatgccgcctattgcagaggaaaaacttgtg
aagcctgttggtcccagcaatgtgctctccatggctcagctccgcactctgcctctggga
gagcaggtcaagaccctgttgaagaacgttaaagtgatgccgtttgctaacctgatgggc
ctgctcgcctccggcacggactcaacggcggcgctgcgctgcatccagcaggtggcgctg
cttgtgcagggcaactgggtggtcaagagtgatgtcctctatcctaaaaacacctgcagt
cctcacagcggggtccctgccgaggtgctctgtcggggccgggactttgtgatgtggagg
ttcactctggagcgctctgtgatgagaaaggagattgcatccatcatcaaacttcctccg
gaggatgtgaaggagttcctggagcatgtggctgttcctcgagtcaaccgcggctgggag
ttcctgctgcccaccgatgtagaatttgtgaagaaacacacagacattgcccacaggcaa
cacatgctgtggctcggcatccagagcaagttggaaaaagtgttcaacttctccaaggaa
gacttcatgccaaagaactcccctcagcctgatcccgtccatgtgaccggggagcagcgt
ctgaagaaggctcaggaccgcgctcagggaaacaagtcgtccatgcagaaggaccgggac
acgagacggtcagaaagcagcgtccaggtcaaacaggaaccggtcagcgacagggaagac
gaacccatggacacctcctcttcctcctccgccatcaacggctctgtgaacggctacccc
agcgccacctcccccgccttcgaccacactaatggtaacacggggagtccggccaacgcg
ccgtctgtggagctgaaggactttgtgaaaaagactttcaagaagcattttgtactgaca
ctgaacgagttcaagaggctgtttggcctccacatcgcctccatgccgtcgggacacagc
atctacccctccatctcggaccacatgctgcaggacgccatactgctctgccagtgcaaa
cagataatggtgccttttcctgctcagaccacagcagccactgatgagcagaaggtgttt
ggtttgtgggagactggagaggagtttgacaagcaacgccgcctgctgtatgaactgttc
aacaagaactaccgcatcaggaggactatgattcaagccaaactcacacaggagttagga
gacgcctgtaaggcggacatcgaccggatgctaaatgagtgctgcatcagccatgcgggg
atgtggtacctcaagggaacggttccgtcctga

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