Trematomus bernacchii (emerald rockcod): 117474067
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Entry
117474067 CDS
T09643
Symbol
atrnl1b
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tben04091
]
117474067 (atrnl1b)
Lectins [BR:
tben04091
]
C-Type lectins
Others
117474067 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_3
Kelch_4
Kelch_6
EGF_LMN_ATRN
Lectin_C
Kelch_2
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_2
TMEM100
EGF_laminin
PSI_integrin
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
117474067
NCBI-ProteinID:
XP_033975974
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MDPGGKCKTELLLFGPKLATHGDLRGINRYLVVCVLFYFVLYTHASPAKPCDKNCLSGKC
INGSCVCDRGWVGDQCQYCHGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSIFAPLVAVFSGLIIPEIRGNETVPEVETTSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSSHGKCTPGNSAASRVYCECDKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCALTVPSTESFWVLPSVKPFGTSLARASHKAVVQE
KVMWVVGGYTFNYSSFQMILNYNLESGIWSTVPVSGGPVPRYGHSLAAYQDDIYMFGGKL
EAGLGNATEELWVFNLPSRTWQRRTPAGGSQTQIYAVEGHSAHCVLLDEGEAIMLVIFGY
SPIYSYVSNVQEYNLRSNTWVVAKTQGAAPQGGYGHSSTFDSASGSVYVHGGYKAFPANK
YGLVDDLYRYDANTRTWFILRESGSARYLHSAVLLSGTLLFFGGNTHNDTSLSNGAKCFS
ADFLAYDIACDEWRVLPKPDLHRDVNRFGHSAVVSNGSMFVFGGFSGMLLNDVLVYRPPS
CQAFLAEEGCVKAGPGVRCIWSRGRCFPWEPSMANGSIIPAPFCPLKAVTVDERCYRFSD
CASCTANTNGCQWCDDKKCLSASSNCTTNVRNFTECPVRNEQVCTKMANCKSCSVNLNCQ
WDQNQSECHALPAQQCSEGWSHVGEACLRINSSRESYDNAQHYCKNLNGNIASLTTSKQV
DFVLEELKKLQQEDKRLSPWVGLRKINVSYWGWEDMSPFTNSSLRWLPGEPSDSGFCAYL
EETQVSGLRANPCTATAHGLICEKATGNPNQSSRPACKKPCSLHTNCANCTNQAMECMWC
GNAQRCLDSTAYVVSFPYGQCLEWQTRDCLAQNCSGLRTCSQCLEQPECGWCGDPSSTGK
GLCTEGSYRGPLKRPAKQGQQVQPSDMVLEPGVCPKDKGFEWAFIHCPACQCNGHSTCVN
GSVCEQCRNLTTGPHCQTCMPGYHGDPTNGGKCQACKCNGHANVCQVLTGKCFCTTKGIK
GDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDNHYTAINFMASPEQANKNL
DMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKEYRDSFSCEKYTFRSNPNITF
YVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASRRR
EQLMRERQQMASRPFASVALSLDSRGEETELLHPVVEGAPKPVAMEPCSGGKAAVLTVLM
RLPSGLSDLPPPGQSGLIVASALIDISQQKPSDFKDKSHGLKNRKAHHPSHQGTCV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtgggaaatgtaaaactgaactgttactctttggacccaaactagccacc
cacggcgacttgcggggtatcaacagatacttggtggtctgtgttttgttttactttgta
ctgtacactcacgcctccccggcgaaaccttgtgacaagaactgtctctctggaaaatgt
atcaacggatcctgcgtctgtgaccgaggatgggttggagaccagtgtcagtactgccat
ggcaggttcaagttgacggagccctcaggatatctcacagatggtccaatcaactacaag
tataaaacaaagtgcacatggctcatcgagggctatccaaatgcggttcttcggttaaga
tttaaccactttgctacagaatgtagttgggaccatatgtacgtctacgatggcgactcg
atatttgctccgctggttgctgttttcagtggtctcatcataccggagatacgaggaaat
gagacggttcctgaggttgagactacttcgggctacgcactacttcacttttttagcgat
gccgcatataaccttacggggtttgaaatattttactcgatcaactcttgtcccaataac
tgctccagtcacgggaagtgcacgcccggtaactcggccgccagcagagtgtactgtgag
tgtgacaagtactggaaaggagaggcctgtgacatcccatactgtaggaacaactgcggc
agccccgaccacggctactgcgacctcaccggggagaagctgtgcgtctgtaacgacagc
tggcaaggcccagactgcgctctcactgttccttcaaccgagtccttctgggttcttcca
agcgtcaaaccctttggcacatcactcgccagagcttcccataaggctgtggtgcaggaa
aaggtcatgtgggtcgtgggcggatacacgttcaactacagctccttccagatgattctc
aactacaacctggagagtggcatctggagcaccgttcccgtcagcggtggccccgtgcca
agatacggccactctctcgctgcctaccaggatgatatctacatgttcggggggaagttg
gaggcgggtttggggaacgcgacggaggagctgtgggtgttcaacttacccagccggacg
tggcagcggagaactcccgcggggggctcacagactcagatttacgccgtggaggggcac
tcggcccactgcgtgctgctagacgagggcgaggccatcatgctggtcatctttggctac
tcccccatctacagctacgtcagcaacgtccaggagtacaacctgagatccaacacgtgg
gtagtagccaagactcaaggagccgctccccagggaggttacggccacagcagcacgttc
gacagtgccagcggcagtgtgtatgttcacggaggctacaaggcatttcctgccaacaaa
tacggccttgttgacgacctctaccgctacgacgctaacacgcggacatggttcatcctg
agagagagcggctctgcgcggtacctgcactcggctgtgctcctcagcggcaccctgctc
ttcttcggcggcaacacgcataacgacacatcgctcagcaacggggccaagtgtttctct
gcggacttcctagcctacgacattgcttgtgatgagtggagggtcctgcctaaaccagac
ctgcacagggatgtcaaccgctttggtcactctgctgtggttagcaatgggtccatgttc
gtgttcgggggcttctccggcatgctgctcaacgatgtgcttgtttaccgaccccccagc
tgccaggccttcttggcagaggaggggtgtgtcaaggctgggccaggggtgcgctgcatc
tggagcagaggacgctgtttcccctgggaacccagcatggctaatggaagcattattcct
gccccattctgcccccttaaagctgtcacagtggacgagcgctgctaccggttctcagac
tgtgccagctgtacagccaacaccaacgggtgccagtggtgtgacgacaagaagtgcctc
tctgcctccagcaactgcaccactaacgtgaggaacttcaccgagtgtccggtgcgcaac
gagcaggtgtgcaccaagatggccaactgcaagagctgctcggtgaatctcaactgtcag
tgggaccagaatcagtcagagtgccacgctttgccagcccagcagtgcagtgaggggtgg
agccatgtgggggaggcctgtctgaggatcaactccagccgcgagagttacgacaacgcc
cagcactactgcaagaacctcaacggaaacatcgcttcgctcaccacctccaaacaagtg
gactttgtgctcgaggaactgaagaagctccaacaagaagacaagcggctttctccctgg
gtgggcctgagaaagatcaacgtgtcgtactggggctgggaggacatgtcccccttcact
aacagcagcctgcgatggctgcccggagagcccagtgactctgggttctgtgcctacctg
gaggagacccaggtgtccggcctgagagccaatccctgcacggccaccgcccacggcctc
atctgtgaaaaagctaccggaaaccccaaccagagcagccgtccagcctgtaagaagccg
tgctcgctgcacaccaactgtgctaactgcaccaaccaggccatggagtgcatgtggtgt
ggaaatgcccagcgttgtttggactccaccgcctacgtcgtctctttcccctacggacag
tgtctggagtggcagactcgagactgtttggcccagaactgctccggcctgcggacatgt
tcccaatgtttggagcagcctgagtgcggatggtgcggagaccccagcagcacggggaag
ggtctctgcacggagggctcttaccgggggccgctgaagagaccagcgaagcagggacag
caggtccagccctcggacatggtcctggagccgggcgtctgccccaaagacaaaggcttc
gagtgggccttcatccactgccccgcgtgccagtgcaatggccacagcacttgtgtgaac
ggcagtgtgtgtgaacagtgccgtaacctcaccaccggtcctcactgccagacctgcatg
cctggttaccatggagacccgaccaatggaggcaaatgccaggcctgtaagtgtaatggt
catgcaaacgtgtgccaggtgttaactggcaagtgcttctgcaccaccaagggcatcaaa
ggagaccagtgccagctatgtgactcagaaaaccgttaccttggcaatccactcagagga
acctgttactacaacctcctgatagactaccagttcaccttcagtctcatccaggaagat
gataatcactacacagccatcaacttcatggcctcacctgagcaggctaacaagaacttg
gacatgtccattaacgcatccaacaactttaacctgaacatcacctggtcggtgggatca
acagctggaaccatctctggagaggaagtgcccatcgtgtccaaaactaacatcaaggaa
tacagagacagtttctcctgtgagaaatacacctttagaagcaaccccaacatcaccttt
tatgtctacgtcagtaacttctcatggcccatcaagatccagattgccttctcgcaacac
aacagcatcatggaccttgtccagttctttgttacatttttcagttgcttcctgtctctc
ctcctggtggctgcagtggtttggaagatcaaacagacctgctgggcttcacgacggaga
gaacagctgatgagagagcgtcagcagatggccagtcgtccgtttgcctcagtcgcgctc
tcactggattccaggggagaagaaacggaactgttgcatcctgtggttgaaggtgcacct
aaacccgttgccatggagccgtgttcaggaggaaaagctgctgtgttgaccgtcctcatg
cgtcttccctctgggctctcagacttacctcctccaggacagtcaggactcatcgttgcc
agtgcgttgatagacatttcacagcagaaaccatcagattttaaggacaagtcccatggt
ttaaagaacagaaaagcccatcatccatcgcaccaaggcacctgtgtctga
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