Trematomus bernacchii (emerald rockcod): 117474117
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Entry
117474117 CDS
T09643
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecule (CAM) interaction
tben04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117474117 (lrrc4bb)
04517 IgSF CAM signaling
117474117 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117474117 (lrrc4bb)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
NGL family
117474117 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
117474117
NCBI-ProteinID:
XP_033976046
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MRVVMVTSPCSPSPLLWLVQILLWFHNHGPQLTEAGPACPNPCTCSNQASRVICTRKSLE
QVPESISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNAYSYFTTVTVETVDTVRDREENSARQDINMTFIEFPNP
TSRRGVLEGRPGITIPPSLSSLSSLSPRANRGTDNTVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGSGEGTLRIHHHPEIVNLPNIGRSDTLNHYYKTHHFNNNVMGLSIGSDGMGQGMMINS
KNQQMHDIPISCTSVPISTANMLSSSGNGNNMNPCSMSPPLPMSLPMPTMGLHGSIKGFM
GQHQNPQMEPLLFKGNSKENVQETQI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgttccccttcccccctcctctggttggtccag
attctgttgtggtttcacaaccatggaccccagctgacagaggcaggacccgcctgcccc
aacccttgtacatgctccaatcaggcgagccgtgtcatctgtaccaggaagagtttagag
caagtcccggaaagtatttcagagaacacaagatacctcaatctacaagagaacactatt
caggtgatcaagtctgacacgtttaagcacctgcggcatctggaaatcctccagctctcg
aagaaccacatccggcagattgaggtgggagctttcaatggccttcccaacctcaacacg
ctggagctttttgacaaccgtctcacagtggtaccgtcacaagcctttgagtacctcagc
aagctaagggaattatggctacggaacaaccccattgagacactgccggcctttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaaactggatttcatc
tcggaggcggccttcgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggatatccctaacctcaccccactagtgcgactggaggagttggagctgtcaggg
aaccagctggggatagtcaggcctggatccttccagggcctggtgtcacttcgcaagctg
tggcttatgcactccagagtgtcagtcattgaacgcaatgcctttgatgacctcaaaaac
ttggaggagctcaacctctcccacaattccctgcattccctgccccatgacctcttcacc
cctttgcaccagttggagagggtacatctcaaccacaacccttgggtgtgcaactgcgat
gttctgtggctcagctggtggctgaaagagactgttcccagcaacaccacctgttgtgct
cgatgccatgcacccccaggtataaaaggcaaatacattggggaactagaccagagccac
ttcacctgctatgccccagtgattgtcgagccacccactgatcttaatgtcacagagggc
atggctgctgagctgaaatgtcgtacaggaacctcgatgacctctgtgaattggttcact
ccaaatggcaccctgatgacccacggatcgtaccgagtgaggatctcagtgcttcatgac
ggaacactgaacttcaccaacgtgaccgtgcaagacacggggcagtacacttgcatggtg
accaactccgccggaaacaccactgcaaccgctgtgctcaatgtgtctgcttcagacccc
agcaacgcctacagctatttcaccactgtcaccgtggaaacagtagatacagtgagagat
cgagaggagaactcggcaagacaggatattaatatgaccttcatagaatttcctaatcct
acgagccgaagaggggtgttagagggccgaccaggaatcactataccgccttctctctcc
tctctttcctcactgtccccacgagccaacagaggtactgataatactgtgactgtgtca
ataatggatgtaactaatattccaggcttggatgatgtaatgaaaacaactaagatcatc
attggttgtttcgtcgcaattacctttatggcagctgtaatgttggtggtcttctacaaa
ctccggaagcagcaccagctacacaagcaccatggccccgcaagagccatagagattgtc
aatgtcgaagatgagatcggagctggggccgggagcggcatctcagggggttcaacgatg
aattctggcagcggagaaggaaccctaaggatacaccatcatccagaaatagtcaacctc
cccaacattggccgtagtgatactctcaaccattactacaagacccatcatttcaacaac
aacgtgatgggtctcagcattggctccgacgggatgggacaaggaatgatgatcaatagc
aagaaccagcaaatgcacgatatccccatctcctgtacctcagtcccaatctctaccgct
aatatgctcagctcatcaggaaatggcaacaacatgaacccttgttctatgtctccaccg
ctgccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatg
ggccaacaccagaatccccaaatggagcctctcctcttcaaggggaactcaaaggaaaat
gtccaagagactcagatctaa
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