Trematomus bernacchii (emerald rockcod): 117474441
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Entry
117474441 CDS
T09643
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117474441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117474441
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117474441
Intermediate filaments
Intermediate filament-binding proteins
117474441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
PH_11
Elf4
FERM_C1_MyoVII
PH_17
PMC2NT
Motif
Other DBs
NCBI-GeneID:
117474441
NCBI-ProteinID:
XP_033976112
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MAEEEGWIREKEQILSSLENAKDLTGSLRLLSQQRALEHEMSGRNGLLKNTIAEGQDMVQ
AGHFAATKIQERVCDLQDQWAALERLAAARKRKLEEALALHQFQTDADDVDAWTLDALRI
VSSGETGHDEFSTQALVRKHKDAAAEVSSYRSVIDSLQEQAAALPEEEAQSEEVRGRLAG
IEERYKEVSELTKLRKQALQDALALYKMFNEAHACQVWIDEKEQWLNSMEIPEKLEDLEV
IQHRFESLEPEMNNQASRVAVVNQIARQLKHNGHPSETDIKTQQDQLNNRWSQFRDLVDL
KKESLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLA
AIEDKLGDLRGEAERLATEHPDQAKAITGRLAEITAVWEEMKNTLKTREESLGEARKLQQ
FLRELDDFQSWLSRTQTLIASEDMPNTLAEAEKLMAQHEGIKNEVQNYEEDYQKMRDMGE
LVTQGQTDAQHMFLRQRLEALHTGWNELHKMWENRQNLLTQSHAYQLFLRDTKQAEAFLN
NQEYVLAHTEMSSTLEGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAERI
QERVASIDERHKKNREAAVELLMRLKDNRDLQRFLQDCQELTLWINEKMLSAQDLTYDEA
RNLHSKWLKHQAFMAELQSNKEWLDQIQKDGRLLVSEKPETEAVVTEKLSDLHAMWAELE
STTQTKAQCLFDANKAELFTQSCTDLDEWMGSMEGQIQSDDYGKDLTSVNILLKKQQMLE
KQVEVRQREVGQLQSQVKALGQEEQDTEEVDGRRQLLEDKFTELLDPLQRRRDFLVESRE
VHQFTRDVEDEILWVQERMAVATSSDHGNNLQTVQLLIKKNQTLQKEIQGHQPRIDDILE
RSVSLLKDESSEATRGRLAALQELWAQLKEEAQRRLDRLQEAHRAQQYYFDAAEAEAWMS
EQELYMMSEEKAKDELSAVTMQKKHQIAEQAVEDYAEAVHLLSKTSRGLVAEAHPESERI
SMRQSQVDKLYAGMKDLSEERRGRLDERLRLFLLNREVDELEQWVAEREVVAGSHELGQD
YEHVTMLQERFREFARDTGNIGQERVDTVNRLADDLINAGHGDAATVAEWKDGLNEAWAD
LLELIDTRTQILAASFELHKFYHDGKEILLRIVDKQKKLPEEAGRDQNTVETLQRMHSTF
EHDIQALGTQVRQLQDDAVRLQAAYAGDKADDIQRREQEVLEAWRFLLEACDARRLRLIH
TGDKFRFFSLVRDLMLWMEDVIWLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTT
CIELGKSLLARKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAGVA
EAWLLGQEPYLSSREVGYSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRR
LQEEELQRRRPPPSPSPEPQQEEAQQQSVTQNGLPSDPESPPEGVVAPPMVNGDGGSKDP
SPGSSPPPSRKKSSQASTLPLRTPDAGTLLEGNLHRKHEWEGPNKKASNRSWHNVYCVVN
KQEVSFYKDGKAAATGLSYHGETSLRLQDAVCDVASEYKKKKHVFKLRAADGNEYLFQAK
DEEEMSSWIAAVLNAGSERSDRSDRSEPPGSIPGTPVSGRAQTLPNESSPGKREKDKEKE
KEKEKRFSLFSKKKQ
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggagggctggatccgggagaaggagcagatcctgtcctcgttggagaac
gccaaagacctgacgggttctctaagactgctgagtcagcagcgagcgctggagcacgag
atgagcggccgcaacggactcctgaagaacaccatcgctgagggccaggacatggtgcag
gccggacactttgccgccacaaagatccaggagcgtgtgtgcgacctgcaggaccagtgg
gcggctctggagcgcctggcagcggcgaggaagaggaagctggaggaggctctggcgctt
catcagttccagacggacgcagacgacgtggacgcctggacgctggacgccctgcgcatc
gtgtccagcggagagaccggccacgacgagttctccacgcaggcgctggtccggaagcac
aaggacgcggcggcggaggtctccagctaccggtccgtcatcgactcgctgcaggagcag
gccgccgcgctgccggaggaggaggcgcagtctgaggaggtccgcgggcgcctggccggc
atcgaggagcgatacaaggaggtgtcggagctgacgaagctgaggaagcaggcactgcag
gacgcgctggcgctctacaagatgttcaacgaggctcacgcctgccaggtctggatcgac
gagaaggagcagtggctgaacagcatggagatccccgagaagctggaggacctggaggtg
atccagcaccgcttcgagagcctggagccggagatgaacaaccaagcgtcccgggtcgcc
gtggtgaaccagatcgcccggcagctgaagcacaacggacacccgagcgagacagacatc
aagacgcagcaggaccaactcaacaacaggtggagccagttcagagacctggtggacctg
aagaaggagtccctgaactcggcgctcggcgtgcagaactaccacctggagtgcaacgag
accaagtcgtggatcaaggagaagaccaaggtgatcgagtccacgcaggagctgggcaac
gacctgacaggtgtcatggcgctgcagcgcaaactcaccggcatggagcgagatctcgcc
gccatcgaggacaagctgggagacctgcggggcgaggcagagcgtctggccacagagcac
ccggaccaggccaaggccatcacgggccggctggcggagatcacagcggtctgggaggag
atgaagaacaccctgaagacccgcgaggagtctctgggtgaggccaggaagctgcagcag
ttcctgcgcgagctggacgacttccagtcctggctgtctcgcacacagaccctcatcgcc
tccgaggacatgcccaacacgctggccgaggccgagaagctgatggcgcagcacgagggc
atcaagaacgaggtgcagaactacgaggaggactaccagaagatgcgggacatgggcgag
ctggtgacccagggccagacggacgcccagcatatgttcctgaggcagcggctggaggcg
ctgcacaccggctggaacgagctgcacaagatgtgggagaaccggcagaaccttctgacc
cagagccacgcgtaccagctgttcctcagggacaccaagcaggccgaggccttcctcaac
aaccaggagtacgttctggctcacacggagatgtcctccacgctggaaggagctgaggca
gccatcaagaagcaggaggacttcatgaccacgatggacgccaacgaggagaagataaac
ggcgtggtggaggcggggcggcgtctcgccagcgacgggaacatcaacgctgagagaatc
caggagagagtcgcctccatcgacgaaaggcacaagaagaaccgcgaggcggcggtggag
ctgctgatgaggctgaaggacaacagagacctgcagaggttcctgcaggactgccaggag
ctgactctgtggatcaacgagaagatgctgagtgctcaggacctgacgtacgacgaggcc
cggaacctgcacagcaagtggctgaagcaccaggccttcatggccgagctgcagagcaac
aaggagtggctggaccagatccagaaggacggccggctgctggtgtcagagaagccggag
acggaggctgtggtgacggagaagctgtcagatctgcacgccatgtgggcggagcttgag
tccaccactcagaccaaagctcagtgtctgttcgacgccaacaaggcggagctcttcact
cagagctgcaccgacctggacgagtggatgggaagcatggagggtcaaatccagtctgat
gactacgggaaagacctgacctccgtcaacatcctgctgaagaaacaacagatgctggag
aagcaggtggaggtgcggcagcgggaggtgggccagctgcagagccaggtgaaggctctg
ggacaggaggagcaggacacagaggaggtggacggacggagacagctgctggaggacaag
ttcaccgagctgctggaccccctgcagaggaggagggacttcctggtggagtccagggag
gtccatcagttcaccagggacgtggaggacgagatcctgtgggtgcaggagaggatggcc
gtggccacgtcctcagaccacgggaacaacctgcagacggtgcagctgctcatcaagaag
aaccagacgctgcagaaggagatccagggtcatcagcctcgtatcgacgacatcctggag
cgcagcgtcagcctcctgaaggacgagtcctcggaggcgacccgtgggcgtctggcggcg
ctgcaggagctgtgggctcagctgaaggaggaggcgcagcgacgcctcgaccgcctgcag
gaggcgcaccgtgcgcagcagtactactttgacgctgccgaggccgaagcctggatgagc
gagcaggagctgtacatgatgtctgaggagaaggccaaggacgaactgagtgcggtcacc
atgcagaagaagcatcagatcgcggagcaggcggtggaggattacgctgaggcggtgcac
ctgctgtccaagaccagcagaggcctggtggccgaggctcaccccgagagtgagaggatc
agcatgcgtcagtctcaggtggataagctgtatgcaggtatgaaggacctatcagaggag
aggcggggccgactggatgagaggctccgcctcttcctgctgaacagggaagtggacgag
ctggagcagtgggtcgctgagagggaggtggtggcaggaagtcatgaactgggacaggac
tacgagcacgttactatgctgcaggagcgtttccgggagttcgcccgcgacacggggaac
atcggtcaggagcgcgtggacacggtgaaccggctggcggacgatctgatcaacgcgggg
cacggcgacgcggccacggtggcggagtggaaggacgggctgaacgaggcgtgggccgac
ctgctggagctcatcgacacccgcacgcagatcctcgccgcctccttcgagctgcacaag
ttctaccacgacggcaaggagatcctgctgcgcatcgtggacaaacagaagaagcttccg
gaggaggcgggacgcgaccagaacaccgtggagacgctgcagaggatgcactcgaccttc
gagcacgacatccaggcgctggggacgcaggtgcggcagctgcaggacgacgcggtgcgc
ctgcaggcggcgtacgcgggggataaagctgatgacatccagcggagggagcaggaggtt
ctggaggcctggaggttcctgctggaggcctgcgacgcccggaggctgaggctcatccac
accggggacaagttcaggttcttcagcctggtgagggacctcatgctgtggatggaggac
gtgatctggctcatcgaggcccaggagaaccccagagacgtgtcgtcggtggagctgctg
atgaataaccatcagggcatcaaggcggagatcgatgctcgtaacgacagcttcacgacc
tgcatcgagctcgggaagtcgctactggcccggaaacactttgcttctgaggagatcaag
gagaagctgctgcagctgacggacaagaggaaggagatgatcgataagtgggaggaccgc
tgggagtggctgagactggtgctggaggtgcaccagttctcccgggacgcgggcgtggcc
gaggcctggctgctgggccaggagccctacctctcctccagggaggtgggctacagcgtg
gacgaggtggagaagctcatcaagcgccacgaagccttcgagaagtctgctgccacctgg
gaggagaggttctccgccctggagaggctcaccacgatggagctgctggaggtgcgccgg
ctgcaggaggaggagcttcagaggaggagaccccccccctccccctcccccgagcctcag
caggaggaagctcagcagcagagcgtcactcagaacggactgccctccgacccagaatcc
cccccggagggggtggtcgctccccccatggtgaacggtgacggcggctctaaggacccg
agccccggcagctcgccccccccctccaggaagaagagcagccaggcctccacgctgccc
ctccgcacccccgacgccgggaccctgctggaggggaacctgcaccggaaacacgagtgg
gaggggcctaacaagaaggcctccaacaggtcgtggcacaacgtgtactgcgtggtcaac
aaacaggaagtgagtttctataaagacgggaaggcggcggcgactggcctctcgtatcac
ggagaaacatcgctgcgcctgcaggacgccgtctgtgacgtggcctcagaatacaagaag
aagaagcacgtcttcaaactacgagctgctgatggaaacgagtatctgttccaagccaaa
gatgaagaggagatgagttcctggatcgcggcggtcctgaacgccggctccgagcgctcc
gaccgttccgaccgctccgagcctcccggcagcatcccgggaacgccggtgtcgggtcgc
gctcagacgctgcccaacgagtcgagtcccgggaagagagagaaggacaaagagaaggag
aaggagaaggagaagcgcttcagcctgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
