KEGG   Trematomus bernacchii (emerald rockcod): 117474538
Entry
117474538         CDS       T09643                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117474538 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117474538 (polr1e)
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     117474538 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 117474538
NCBI-ProteinID: XP_033976265
LinkDB
Position
Unknown
AA seq 420 aa
MITTMAASCSLVCCEEERDSDKAVIVRFSNGNVQNAEQLGFTMYKNADETNPRKKSRRIM
AAESDRLSYVGNNFGAESLKCNNLCKYYVGVLNKETMQMEVHCAELFNMQPVIPGEIEEY
AKTQDPTQTYRDKVDSLIEAFGTNKQKRALSSRRLNQVGSDTLHQAVAKAANTVIDQKGL
EALQQEVAETEAQGDLAFHLPPCNAGADRPEDVYLFDDFLSPVEFASLEQAGTKMASLTP
EELKKLRDDGGCLSVVKHLENLPSVGEARDKISRCAFYLSLLLNLARQRSITRKFGQEEG
CPRNIQSKLFRTFTVESFNSGRVQNVVSSSMRSKLAAYSLALLLHMSHMTCDITLLHRDL
AITEARMIDVAKSMGLTLIKLPRVKAEEDGVRDTTRQAALVLPLVKYEQSMERRKRKKLH
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgataacaactatggctgcctcctgctcgttggtgtgttgtgaagaggagagagactcc
gacaaagctgttattgttcgcttttcaaacggcaacgtccaaaatgcagaacaactgggt
ttcacgatgtataagaacgcagatgagactaaccccaggaaaaagagcaggcggataatg
gctgctgaatcagacagactgtcctatgttggaaataactttggagcagagtctttgaaa
tgcaacaacctttgcaaatattatgtaggagtgttaaacaaggagaccatgcaaatggag
gtgcactgtgctgagctcttcaacatgcaacctgttataccaggagagattgaagagtat
gcaaaaacccaggaccccactcagacctacagagataaggttgactctttaatagaggcg
tttggcaccaacaaacagaagagagctctgagctcccgcaggctcaatcaggtgggcagt
gatactctgcaccaagctgtggccaaggctgccaacaccgtgatcgaccagaagggtctg
gaagctctccaacaggaagtggctgagacagaggcccaaggagacctggctttccacctg
cctccttgcaatgcaggcgctgacagacctgaggacgtttacctatttgatgatttcctg
agtccagtagagtttgcatctttggagcaggctggaaccaagatggcatcacttacccct
gaggagctgaagaagttgagagatgatggagggtgcttgtctgttgtgaagcacctggag
aacctgccatctgttggtgaagccagagataaaatatctcgatgtgccttttacctttct
ttgctcctcaatctggcacggcagcggagcatcacccgcaagttcgggcaggaggaaggc
tgtcctcgcaacattcagagcaaactgtttagaacattcactgtggagagttttaacagt
ggcagggtccagaacgttgtgtcatcatcaatgcgttccaaactagcagcttactccctg
gccctgctgctgcacatgagtcacatgacctgtgacatcacattactccaccgtgacctg
gcaatcaccgaggccaggatgattgacgtagcaaagtcaatgggactgactctaattaag
ttgccccgggtgaaggctgaggaggatggggtgcgagacacaaccaggcaggctgctctt
gttctacctctggttaaatatgagcagtccatggagagacggaaacgcaagaaattgcac
taa

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