Trematomus bernacchii (emerald rockcod): 117474659
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Entry
117474659 CDS
T09643
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04115
p53 signaling pathway
tben04140
Autophagy - animal
tben04150
mTOR signaling pathway
tben04218
Cellular senescence
tben04910
Insulin signaling pathway
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117474659 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117474659 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
117474659 (tsc2)
04218 Cellular senescence
117474659 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117474659 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117474659 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117474659 (tsc2)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117474659 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
117474659
NCBI-ProteinID:
XP_033976495
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MNKQPSKESLKDKVKGIFGLGTPRPLSKQSDARPSEFIITTDIIKELQPDCGLSTRVRMM
NHVCELAKTKKFEDHAVEAVWKAVEDMLTPEQPLEARHAVLQLLRAIIQGQGERLGPLRA
FFFNVIRDYQPSNEDLSDRLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSVMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSSANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQTIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIQSLHRLMEKFFRNETRSVIRIKVLHILSFVLSTNRQLY
EDELIEMVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFNSLLDIIEKVASRSLV
SSGPLEVTERDPTGESPMEDVRTAILGLLEILQSKLYSLPAGHASRVYELLISHLQLHYK
NKYCSAIACSIRLQVFDFFLMMRVDSLHRLGVPNKDGVLRFSPYCYCDTGILNGGFREPE
KRVSEKKPAGSTSPPAGSPAPLTAPSTASIRSAYLPYAPAFNVLLQGLKMETDWKVLKLV
LDKLPWTLQYKVLLLTSPCSLDQLCSTLCCMVTDRLISERLKKTPDGFSRTDVQLAVVPV
LTAITSYHNYLEQARQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVK
LTHISATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLA
HHVIAMWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSAFRARSTSLNERPKSMRA
AKVAKAAAAVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMHTSTTTCSLGSADEN
AVTPADEGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLTGGRSMTWLVGNKL
VTITTSGGVRAQALLGLDMAERLGGGGEMTRSDPSLHTRITKEAPAKLESQSSQQHNRAT
RIRVRSMSGGHALRAGPAQSLSPLVSPSEGELAAPLSPPSVSTLDGLGPPPSSSSSSAAP
SAPPPLRDNPSLAEFIPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQEL
STVLMGMEGVKEPPAQTASAPASTAAPAPELPTHSSVGGKPNLIQRSNTVGGSLWSLGSG
SGPPGPPAPGRLHRSISWADSVVVLEEGSGVTAAQTPDWLESEEFEPMPSDPIFMSADKF
TKTPPPGTLSRSSSTSSQDDEKSTLEEVSEGAIPIDQPTMGPSTPGSQGPELPFQSHSPS
QGHGLNKSSSSPELQTLPEAFSKAALESQAALVEPSAPKAPADSKPPPQQLQSEKEKVEG
GTGGDTNGLGSQSQGSDSPVVSSLGGGARMRLEFPAPAAPSGPISPGGGHRPRGHTISVS
APSSRRERRTERDSYTSRPGPSTTEKISGLSPSFVFLQLYHSPFFGNEANKPLLLPKTQV
IDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVAILSNEYGSNRYAAFLTGLGKLIHLKD
CDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFHIATLMPNKESDKGCCNKKRHIGNDFV
MVVYNDSGEEYKLGTIKGQFNFVEVIIKPLDYDCNLVTLQCRKDLEGLVDTTVAKIVSDR
NLPLLVRQMALHANMASLVHQFRANPSDAYASKWLARLRHIKRIRTRAQEDIQSRATPGI
SLTQGHTQQNKSFQQSSQNTEVSGQRKRLVSTVDDFTDFV
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaccgagcaaagagagtctcaaggacaaggtgaaggggatctttgggctg
ggaaccccgcggccgctcagcaaacagagtgacgcccgaccgtcagagttcatcatcacg
acggacatcatcaaggagctccaaccagactgcggtctgagcacccgcgtccgcatgatg
aaccatgtctgtgagctcgccaaaacaaagaaatttgaggatcatgctgtggaggctgta
tggaaagccgtggaggacatgctgactccagagcagccactggaggccagacatgcggtc
ctgcagctgctgagggccattatacagggacagggcgagcggctcggccctctgagagca
ttctttttcaacgtgatcagagactaccaaccatccaacgaggacctctctgataggctg
gaagtcttcaaggccttaaccgagaacgggaaagacatcacttatctggaagaagatata
gcacgctttgtcctcctgtggatggacataggtcttacctccgattttctccatgttctt
gtaaatctggtgaagttcaacagctgctacctggaccaaaacgtctccgtcatggtccag
aaaatctgcctcctgtgcaatagaactacatcttcaacagatattgaggtggcactacaa
gtattggatgcagtggtgtgttacaactgcctgccctcagactctctcactgtcttcatc
atcacactgtgtcgcactgtcaacgtcaaggagttctgtgaatcctgctggaagttgatg
aggaaggtgttggggactcacctcggccacagtgcaatctacaccatgtgccggataatg
gaggagagagtgtacatggaggacgccccgttgttgagaggagccgtgttctttgttggg
atggcactgtggggcgcacacagactccccgccctgaaaaacacacctacactcgttctg
ccatctttctacaaggccatgtcgagtgccaatgaggtggtgtcctatgaaatcgtcctc
tccatcaccagactgatcaagaagtacggcaaagagctgcaggtggtcacatgggacatc
ctgctgggcatcatagagcggctgctgcagcagatccagacaataggcagtgcggagttg
aaggccattgtgtacgagctgctgaccacagtggaggagctgtacgagcagaacggttac
cacggctccacagagaagttcttcagtctggtggagaaatgtgccgacaagagacctgat
gcatcagtgctgaccctcatctcgtacagagcccagtctattcaaccagccaaggacggc
tggattcagagccttcaccgcctcatggagaaattcttcagaaacgagactcgcagcgtg
ataaggatcaaagtacttcatatcctgtccttcgttctcagtaccaaccgacagctttac
gaggacgagttgattgagatggtggtgatcccccagctcagtgggatagctgaagaccgt
gaccttgctgttcgaaaacaggccacccagctgctggtggacctggcagagggctgcaac
acacaccacttcaatagcctgctggacatcattgagaaggtggccagccgctctctggtg
agttcagggcccctggaggtcactgagagagaccccacaggagagtctcctatggaggac
gttaggacggctatactgggcctgctggaaatcctgcagagcaagctctacagcctacca
gccggtcacgccagtcgtgtgtatgagctgctaatcagccacctgcagctccactacaag
aacaaatactgctcagctatcgcttgcagcatcagactgcaggtgtttgacttcttcctg
atgatgcgagtggactctcttcaccgccttggtgtccccaacaaagacggggtcctgagg
tttagcccttactgctactgtgacacagggattttaaatggtggtttcagggagccagag
aagcgtgtcagtgagaagaagcctgcaggttcaacatctcctcctgctggcagccctgcc
cccctcactgctccttcaacagcctccatccgctcggcctacctgccctacgcaccagcc
ttcaatgtcctcctgcagggcctgaagatggagaccgattggaaggtgctgaagctggtt
ctggacaagctgccgtggacgctgcagtacaaagtgctgctgctcacatccccatgcagc
ttggaccagctgtgctccacactctgctgcatggtgacagatcggctgatctcggagcgt
ttgaagaagaccccagacgggttttctcgcactgacgttcagctggcggtggttcctgtt
ctcacagccatcacctcctaccataactacctggagcaggcaagacagagagaactggtt
cagtgcctcgagaccggcctcatctaccgctgtgccaagcagtgtgtggtggcgcttaca
atgtgcacggtggagatgcctgacatcatgatcaagctcctccccgctcttatcgtcaag
ctcacccacatctctgccactgttgccatggcatcacctatgctcgagttcctctccact
ctggtgcgcctcccacatctgtacgccaactttgtagctgagcagtatgtcagcgtgttt
gccatctctctaccctacactaacccttccaagttcaaccagtacatcgtatccctggcc
caccatgtgatcgccatgtggttcatacgctgcagactccccttccgcaaagactttgtt
cagtacatcacaaagggtctgcgctccaacgccctgctgccgttcgatgacggtcacgag
cagagtgcgtttcgtgcccgaagcaccagcctcaacgagcggcccaagagtatgcgggcg
gcgaaagtggcgaaggcagcggcggcggtagccaatagcagcagctctccagttaaagag
ctgagggacctttcggccatggacgctttccgctcccgcagcatcagtgtctcggaacac
gcggttcgcaggatgcacacctccaccaccacctgctctctgggctccgctgatgaaaac
gcggtgactccggcggacgagggtctgaagactgtccacctggagctcactgagacctgt
ctggacatgatggcacgatatgtcttttccaacttctccgccctgcccaaaaggtctccc
attgcagagttccttttaacggggggtcgcagtatgacctggctggtgggcaacaagctg
gtgaccataacaaccagcggaggggtcagagcgcaggcgctgctgggcctggacatggcc
gagcggctgggaggaggaggggagatgaccaggtcagacccatccctccacacccgaatc
accaaagaggctccggccaaactggagtcacagtcgagtcagcagcacaacagagccacg
cgcatacgggtccgctccatgtcagggggccatgctctccgtgccggtcctgctcagagc
ctcagtcctctggtgtccccctctgagggcgagctagctgctccgctctcccccccctct
gtctccaccctggatggtctgggcccccccccctcctcctcctcctcctctgcggccccc
tctgcccccccgcctctcagagacaaccccagcctggctgagttcatccccatgctcact
cagggctgggcagagatcttcatacggaggccgtcaggcaacacgagctggctgatgtgt
ctggagaaccctcccagtcccttctcctcggagctgggcaacatgcctctgcaggagctc
tccaccgtcctcatggggatggagggggtgaaggagcccccggcccagaccgccagcgcc
cccgccagcaccgcggcccccgcccccgagctgccgacacacagcagcgtcggagggaag
cccaacctgatccagcgctccaacaccgtgggcggctctctctggtctctgggttcgggc
tccggccccccaggccccccggcccccggcaggttgcacaggagcatttcctgggcagac
tctgtagtggtgctggaggaggggtcaggggtcaccgcagcacaaactcctgattggctc
gagagtgaagagtttgagccaatgccgtctgatcccatcttcatgtctgcagacaagttc
accaagacccccccccctggaacgctcagcaggtcctcctcaacctccagtcaagatgat
gagaagtccacactggaggaagtaagtgagggagcgattccaatcgatcagcccactatg
ggaccctccaccccgggcagccaggggcctgaactccccttccagagccactctccgtcc
cagggccacggcctcaacaagtccagctcctccccggagctccagaccctaccggaggcc
ttctccaaggcagctctggagtctcaggctgcgctagtagaaccatcggcccccaaagcc
cccgcagacagcaagcccccgccccagcagctgcagtctgagaaggagaaggtggagggg
ggcacaggaggggacactaatggactcggaagtcagagtcaaggcagtgacagccctgta
gtgtcttctctaggtgggggagcgaggatgaggttggagtttccggccccagcggcacca
tccggacccatctcccccggcggaggccaccgaccccggggccacaccatctcagtgtca
gccccctcctccaggagggagaggaggacggagagagactcgtacaccagccggcccgga
cccagcaccacagagaagatctctggactcagcccgagcttcgtcttcctccagctctac
cactctcctttcttcgggaacgaagccaacaagcctctgctgctgcccaaaactcaggtg
atcgaccgcgccgtgaaggtcctggaccagatgcctccgtacgacacccacaagatcggg
gtggtgttcgtcggggccggtcaggtcaacaacgaggtcgccatcctgtccaacgagtac
gggtccaaccgctacgctgccttcctcacaggcctgggcaaactaatccatctgaaggac
tgcgaccccgaccagatcttcctcggagggctggaccagtacggagacgacggagagttc
acctactgttggcatgacgacatcatgcaggccatcttccacattgccactctgatgccc
aacaaggagagcgacaagggctgctgcaacaaaaagagacacattggcaacgactttgtc
atggtggtgtacaacgactctggagaggagtacaagctgggcaccattaagggtcagttt
aattttgtagaagtcatcattaaaccgctggattatgactgtaacctggtgaccctccag
tgccgcaaggacctggagggactagttgacacaacggtggcaaaaatcgtttcagaccgc
aacctccctctcttagtccgacagatggctctgcatgcaaatatggcctctctggtgcat
cagttcagagccaacccatctgatgcctacgcttccaagtggctggcgaggttgcggcac
attaaaaggatccggaccagggcccaggaggacatccagtctcgtgcaactcccggcatc
tcactgacccagggtcacacgcaacaaaacaagtcctttcagcagagcagtcagaacacg
gaagtttccggccagaggaaaagacttgtctcgactgtggacgattttacggactttgtt
tga
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