Trematomus bernacchii (emerald rockcod): 117474691
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Entry
117474691 CDS
T09643
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
117474691
NCBI-ProteinID:
XP_033976560
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALAGLVKDGGKETKTKGKDAKDGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLRSLPFELALC
SKLSIMSIENCPLNHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gctgggaaagaaagggaaaaagaggccaaggctctagccggcttagtcaaagatggtggt
aaagaaacgaagaccaaagggaaagatgccaaagatggaaagaaggacaccagcagctca
acaccgggtgttgccttctcggttgacaatacgattaagcggccaaacccggcagcaggt
acacgcaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgccgggaggag
aactcaatgagactggacctatctaaacggtccattcacatgctgcccacctccattaag
gagttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccggct
gaggttggttgcctgtcaggcctggtcactttggccctgagcgagaactccctgaccagt
ttgcctgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccggctgttgtctaccgactaacatctctgaccacgctgtacctgcgc
ttcaaccgcatcacaaccgtggagaaggacatccgaaacctttccaagctcactatgctc
agcattcgggagaacaagattaaacagctgcctgcagagataggggagctatgcaatctc
ataactctggatgtggcacataaccagttagaacacctaccgaaggagatcgggaattgc
acacagataaccaacctcgacttgcagcacaatgagctcttggacctaccagagactata
ggcaaccttgcaagcataaatcgcttagggctgcgatacaatagattgtcagcgatcccc
agatcattagcccaatgccgagagctggaggagctaaacctggaaaacaacaacatttcg
gtgttgcctgaaggcctactttcaagtttggtcaacctaaccagtctaacactggcaagg
aactgcttccagtcgtaccctgtggggggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgcatcaacaaaatcccctttggcatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatcgctgccgttggactttggcaca
tggacgagcatggtcgagcttaacctggccaccaatcagctgacaaagatcccagaggac
gtctgtggtttagtctctctggaggtgttaatattgtccaataatcttctcaagaagtta
ccacatggtattgggaatttgagaaagctacgggagctcgacttggaggaaaacaagttg
gaatctctacccaatgaaattgcttatcttaaagatatacagaaattggtgttgacaaat
aatcagctgaccacgttacccagaggcatcggccacctcaccaaccttactcatctgggt
ttgggggagaacctgctgcaacacctcccagaggaaataggtacactggagaacctggag
gagctgtacctcaacgacaaccccaacctgcgcagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcaaccacctgccgccccagatt
gtcgcagggggcccctccttcatcatccagttcctcaagatgcagggaccgtaccgtgcc
atggtctga
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integrated database retrieval system
