Trematomus bernacchii (emerald rockcod): 117474762
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Entry
117474762 CDS
T09643
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117474762 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117474762 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117474762 (zgc:136908)
03009 Ribosome biogenesis [BR:
tben03009
]
117474762 (zgc:136908)
04131 Membrane trafficking [BR:
tben04131
]
117474762 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117474762 (zgc:136908)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117474762 (zgc:136908)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117474762 (zgc:136908)
Membrane trafficking [BR:
tben04131
]
SNARE
SNARE associated proteins
Others
117474762 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117474762 (zgc:136908)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117474762 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
CDC48_2
AAA_2
AAA_22
TIP49
AAA_14
Vps4_C
RNA_helicase
NPHP3_N
Parvo_NS1
AAA_28
ATPase_2
nSTAND3
Mg_chelatase
ATPase
DUF815
IstB_IS21
AAA_18
AAA_7
ABC_tran
AAA_17
NACHT
TsaE
ResIII
AAA_24
Sigma54_activat
PhoH
NB-ARC
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Cytidylate_kin
Rad17
ORC-CDC6-like
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
117474762
NCBI-ProteinID:
XP_033976654
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MPSSGGADPKGEDFSTAILKQKHRPNRLIVDEVLTDLSKAHNEDGSIVSLSQDKMEELQL
FRGDTVVLKGRKRRQTVCIVLTDNTCGQERVRMNRVTRNNLRVRLGDVISIHACPDIKYG
KRIHVLPIDDTIEGLSGNLFDVFLKPYFLESYRPVHQGDIFLVRGSMRGVEFKVVETDPG
PHCIVAPDTVIYCEGDPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFK
AIGVKPPRGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPAIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPN
SIDPALRRFGRFDREIDIGIPDSTGRLEILQIHTKNMKLGDDIDMERIAKETHGHVGADM
AALCSEAALQAIRKKLTLIDLEDDTIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEV
PQVNWEDVGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAI
AHECQANFISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAG
DGSGAADRVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKA
SRTAILNANLRKSPIAKDVNLDFLSGITEGFSGADLTEICQRACKMAIREAIEAEIKAER
ERQNRPGVPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFSQTLQQSRGFGNF
RFPSATGTRSGGQGSDSGSGGPGQQSEESNDDLYQ
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcaggaggagcagatccaaagggagaagatttctccactgccatcctgaag
cagaaacacagacccaacagactcattgtggacgaagtgctcactgatctcagcaaagct
cacaatgaagacggcagcatcgtcagcctgtcacaggataagatggaggagctgcagctg
ttccggggggacacggtggtgttgaaagggaggaagcgtcgccaaacggtgtgcatcgtc
ctgactgataacacatgtgggcaagaacgagtccgcatgaaccgtgtgacgcgcaacaac
ctgcgtgtccggctcggtgatgtcatcagtattcatgcctgccctgatatcaagtatggg
aaacggatccatgtcctcccaatagatgacaccattgagggcctgtctggaaacctcttt
gatgttttcctcaaaccgtacttcctggagtcttaccggcccgtccatcaaggggacatc
ttcttggtgagggggagcatgaggggggtggagttcaaggtggtggagactgaccccgga
cctcactgcatcgtagccccggacactgtcatctactgcgagggagacccaatcaaaaga
gaggacgaggaagagagccttaacgacatcggctacgacgacatcggaggctgtcggaag
cagctggcgcagatcaaagagatggtggagcttcctctcagacacccgggcctcttcaag
gctataggagtgaagccccccagagggatcctgctgtacggccctgcaggcacagggaag
accctggtggcccgggctgtggccaacgaaactggggcctttttcttcctcatcaatggt
ccggagatcatgagtaagctggcaggagagtcagagagcaacctaaggaaggcgtttgag
gaggcggagaagaacgctccggccatcatctttattgatgagctggactccatcgctcct
aagagagagaagacccatggtgaagtggagaggcgtatagtctcgcagctcctgaccctg
atggatggcctgaagcaaagagctcatgtagtcgtcatggcagccacaaaccgaccaaac
agcattgaccctgctctgagacgctttggcaggtttgaccgggagattgacattggaatc
cctgattccaccggcagactggagatcctgcagattcacaccaaaaacatgaagctcggg
gacgatattgacatggagaggattgccaaagagacccacggtcatgtaggcgctgacatg
gctgctctgtgctctgaagctgctctgcaagctatccgcaagaagctgaccctcatcgac
ctggaggatgataccatcgatgcagacctgctcaactcactggctgtcaccatggacgac
ttccagtgggcgctgagtcagagcaacccctcggctctgagagagactgttgcagaggtg
cctcaggtgaactgggaggacgttggaggactggacgaggtcaagagagaactgcaagag
cttgttcagtaccctgtggagtatccagacaagttcctgaagtttggtatgactccgtct
cggggagtgttgttctacggccctccaggctgcgggaaaactctgctggctaaggccatc
gcccacgagtgccaagctaacttcatctccatcaaaggacccgagatgctcaccatgtgg
tttggagaatctgaggccaatgtcagagacgtgtttgataaggccagacaggcagccccc
tgcatcttgttttttgatgagttggactctattgccaaatccagaggagggggagcaggg
gatggaagcggtgcagctgacagagtcatcaaccagatactcacagagatggacggcatg
tcggacaagaagaatgttttcattattggagccacgaacaggccagacataattgacagt
gccatcctgcggccgggtcgtttggaccagctcatctacatcccgctgccggacaaagcg
tctcgcacagcaatcctgaacgccaaccttcgcaagtctcctattgcaaaagatgtgaac
ctggacttcctttctggcatcactgagggtttctctggagcagacctgacagagatctgc
cagcgggcttgtaagatggccatccgtgaggccatcgaggccgagatcaaggctgagcgc
gagaggcagaaccgacccggcgtccccatggatgaagactttgatccagtcccagagatc
aggaaggaccactttgaggaggcgatgcgattcgctcgtcgctctgtcagtgacaatgac
atccgcaaatatgaaatgttttctcaaactctgcagcagagccggggttttggaaacttc
aggttcccctctgctactggtacccggtctggaggtcaggggtcagactctgggtcaggg
gggccgggacagcaaagtgaggaaagcaatgatgatctctatcagtga
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