Trematomus bernacchii (emerald rockcod): 117474776 Help Entry 117474776         CDS       T09643                                  Symbol ccdc88aa Name (RefSeq) girdin   KO K25392   girdin Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tben03037]     117474776 (ccdc88aa) Cilium and associated proteins [BR:tben03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    117474776 (ccdc88aa) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N Motif Other DBs NCBI-GeneID:  117474776 NCBI-ProteinID:  XP_033976671 LinkDB All DBs Position Unknown AA seq 1792 aa AA seqDB search MHLDFCELLDGVFLNDIMTQINPSAVQGANKVSRDPSQRVQNLNSLVQQIKTYYVENLRQ LIMIPLPNVLLFGRTPYCEQSLEETKKLLLLLLGCAVQCEKKEEYIQRIQTLDFETRAAI AAHIQELTLSQENVMDLQWLESSEVHPDELEVVARNMAAHLRHVLDQRDNHLETIAELMQ EKEGVFSLLNSPSSPHSGSYSPSMQQHAGTQQHLAVELADSKAKIRRLRQELEEKSEQML DCRHELENMETELKRIQLENSQLLVDARAARTYRDELDALRERAMKADKLESEVGRYREQ LHKIEFYKAKVEELKEDNRVLQETKEVLEDQLEGWRARSDKIHQLEKHGLLLKATVHDME QEREADRRRIEELQEENLALCLAQRRSMEESQHLGWELEQLSQTTENSQGQQTLSEEVSE RTCSRMLKLEKENQSLLRIIEELRAASINKHGRQLVCSTNNCTSSTDEPRELQTTCSNIQ NRTHVIPFSTVTQQTLNGGSNCHQQLVTEDLEEVQSQIVLTDNPDLHVQEKGQLEDGDDG DHFKELMEDLENHHNRRHCFVGSRDHSPGSKSSSPCHDSILTGLPTRSSYASKHTQRLEA KCRALDTVNLHLQTSLDNTDRKVQRLEAEVQELEAENHSLQATLEELRISARRLEQLEAE KQSLEQETTVLEREKRQLEKDNRRLRQQAEILEANLDSSNVCMASLEREMRFVVKEVEGL RETAERVKGLERDNRELTKQAAIDQRTLATLREELVSEKLNTQQRNNDLERLAHDLEMQV LNQESAQQAQRETPNSSRFKMLESELEASLKRSLQIKEDKMAALEARLQESSNLNQQLRQ ELKTVKQSYEAFQQRQEEEWTASTSSPTSETGKAMSEWLRESQEATKELLKLKDRLIEVE RNNATLEAERQAVQAQLRQLESQCDSQQAQILALQRQAASLQENNTALQTHNANLQVEKS TLNSQSASLMAQNAQLQQQQLGTESERDGAVREREDLRGVHEQLLRDHERLAALHERQAM ECEALMGKHGCLKNAHRTLELEHRTTEDRYNSLLQQRTKLEDLEKALKEEQMRMSLEKEQ HRSTAAECSRLRDEKDWLNQTYRQLLNDNESLTVDHKQLKSQLNEAKLEHTWLEADFSKL KKEFQQLDISSTKLTNQCELLGQLKGNMEEENRHLLCQIETLMLQNRTLLEQTMESKDLF HVEERQYIDKLHDLRRQKEKLEEKIMDQYKFYEPSPPRRRGNWITLKLKKLIKSNSREHG PDCPPTPTHLGGVEPHLVSHDNGSFISSDGSGGSACTSAGDVISPQRHSTTKMFPRMRNR LKDRDKVKSLFRRSMSLSSLVSPASAPLRGERWAESADRLEGSQADVDEDRENTLSSSPS TSISMSILHLNPPTTPPCSHVTITTSDTTDTVPDVSELWVTDKDSNDSAVPSGFEDNDEL QNYGLNGVQSRAQSESSGEFSMSIENEPWSNGSSPIQQPPSRRSSSSSSFQPPSDTSTPQ HTLRQQHKEKASTMPIAHSETQSTPKQKSHGLSQDFWLTRGTKSIRRGSRVKVTRRSSDT VGTVKVNPGCNGVNSKSSSSKVETTRALACSPITVLYVQGKSSSMSGCLNCFSTPLGKEG RLRGSPTCLPRASSVISTAEGSSRRSSVNSDCRAKADLLSVQVSEESHQEEEPGQLELET KNSEPIPPVKPPRDPTAVVPTDEPKPPVQESLLGSSFTFNSVFSNTIFSDSVVPTMSSLD ALDNNQTILGLNPDLGQNCPPETTKTLQNEQRLNVKRDAGLEKDKTLTVARK NT seq 5379 nt NT seq  +upstreamnt  +downstreamnt atgcacttggacttctgtgagttactggatggagtctttctgaatgacataatgacacaa ataaatccctcggctgttcagggtgcaaacaaagtgagcagggatccaagtcagagggtc cagaacctgaactccctcgtccagcaaatcaagacgtactatgtggagaatctgagacag ttaatcatgattcctttgccaaacgtgttgctgtttggcaggactccttactgtgaacaa agtctggaggaaacgaagaagcttctgctgctgctcttgggatgtgctgtccagtgtgag aaaaaagaggagtacatccagaggatccagacgcttgactttgagacgagagctgccata gctgcacatattcaggagttgaccctcagtcaggagaatgtgatggatctgcagtggctg gagtccagcgaggtgcatccggatgagctggaggtcgtagcaagaaacatggccgctcac ctgcgacatgtgctggaccagagggacaaccatctagagactatagcagagctgatgcag gaaaaggaaggagtttttagcttgctcaatagcccctccagcccacattcagggagctac tctcccagcatgcagcagcatgcggggactcagcaacacctggcggtggagctcgccgac tccaaggccaagatcagacgacttagacaagaactagaggagaagagtgagcagatgctg gactgcagacacgagctggagaacatggagacagagctgaagaggatccagctggagaac tcccagctgcttgtagacgcccgcgcagcccgcacctaccgagacgagctggacgccctg agagagagagccatgaaggcagacaagctggagagtgaagtgggacgctacagggagcaa cttcacaagatagagttctacaaggccaaagtagaggagctaaaggaggacaacagggtg ctacaggagaccaaagaggtgttggaggatcagttggaaggctggagggcacgctccgat aaaatccaccagctggagaagcacggtctgctgctgaaggccacggtccacgacatggaa caggagcgggaggcagatcgaaggcgcatcgaggagctgcaggaggagaacctggcgctg tgtttggctcaaaggaggagcatggaggagtcgcagcacctgggctgggagttagagcag ctctcacagaccactgagaactcccagggccagcagactctgagcgaggaggtgagtgag aggacgtgcagtcgcatgctgaagctggagaaggagaaccaaagtctcttaaggatcatc gaggaactcagagctgcctccattaacaaacatggccgccagctggtttgtagcaccaac aactgcacctcatcaacagatgaacccagggagctgcagaccacctgctcaaatatccaa aaccgcactcatgtaatcccattcagcacagtgacacagcagacgctgaatggaggttca aactgccatcagcaactcgtcactgaagatctggaggaggtccagagtcagatcgtcctc acagataatccagacctccatgttcaggagaaaggacagctagaggatggagacgatgga gatcatttcaaagaactgatggaggacttagaaaaccatcacaacaggcgccattgtttt gttggatcacgtgaccactcccctggctcaaagagcagcagtccctgccacgacagcatc ctcacaggtctgccaacacgctcctcctacgccagcaagcacacacagcggctggaggcc aagtgcagggccctggacacggtgaacctgcatctacagacttccctcgataacaccgac cgtaaagttcagcgcctggaggcagaggttcaggagctggaggcggagaaccacagtctg caagccactttagaggaacttcggatctctgcacgacgcctcgagcaactggaagcagag aagcaaagcctggagcaagagaccacagtcctggagagggagaagaggcagctggagaag gataaccgacgtctccgccaacaggctgaaatcctggaagccaacttagacagcagcaac gtctgtatggccagcctggaaagggagatgcgttttgttgtaaaagaggtggaggggtta agggagactgctgagagggtgaaaggcctggagagagacaacagagaactgaccaagcaa gctgctatcgaccagaggaccctggccaccctcagagaggagctggtgagtgagaagctg aacacccagcagaggaacaatgacctggagaggctggcccatgatttggaaatgcaagtc ctgaaccaggagagcgcacagcaggctcagcgagagactccaaacagcagcaggttcaag atgctggagtcagaattggaggcgtctctgaaaagatctcttcagattaaagaagacaag atggcagctttggaggctcgtctgcaggaatcctccaacctgaaccagcagctgcggcaa gagctcaagactgtgaagcagagctatgaggcgtttcagcagaggcaggaggaggagtgg acagcctcaacttcctcccctacctctgagactggaaaggcaatgagcgaatggctgcgt gagagccaggaggctactaaagaactgctgaagctcaaagaccgtctcattgaagtggaa aggaataatgcaacactagaggccgagcgtcaggctgtgcaggcgcagctgaggcagctg gagagtcagtgtgacagtcagcaggctcagatcctcgccctgcagaggcaggccgcctcg ctgcaggagaacaacacggccctgcagacacacaacgctaacctgcaggtggagaagtcc actctgaactcgcagagcgcctccctcatggcccagaatgctcagctccagcagcagcag ttggggacagaaagcgagcgagacggcgccgtgcgggaacgtgaagatctgcgcggcgtt cacgagcagctgctgcgagatcacgagcggctggcggctctgcacgagcgccaagccatg gagtgcgaggccctgatgggaaagcacggctgtttgaaaaacgcccatcgcactctggag ctggagcatcgcaccacagaggacaggtacaacagcctgctgcagcagcgcaccaagcta gaagacctggagaaagctctgaaggaagaacagatgaggatgtccctggagaaagaacag cacaggagcacggctgcagagtgcagcaggctgcgggacgagaaggactggctgaaccag acataccgtcagcttctcaacgacaacgagtcgctgacggtggaccacaagcagctgaag agccagctgaacgaggccaagctggagcacacctggctggaggccgacttctccaaactc aagaaggagttccagcagctggacatctcctccacgaaactcaccaaccagtgtgagctg ctgggtcagttgaagggcaacatggaggaagagaatcgccacctgctctgccagatcgag accctgatgctgcagaaccggaccctgctggagcagaccatggagagcaaggatctgttt cacgttgaagagcgacagtatattgacaagcttcatgatttgaggaggcagaaggagaag ctagaggaaaagataatggaccagtacaagttttatgagccgtcgcctcctcgcagacgt ggaaactggatcaccctgaaactgaagaagttgattaaatccaacagccgtgagcatgga cccgactgcccgcccacccccacacacttggggggtgtggagccgcacctcgtctcccat gacaacggctccttcatcagctcagacggctccggaggctcggcctgcacctcggcaggt gacgtcatctcaccccaacgtcacagcaccaccaaaatgtttccccgcatgaggaacaga ctgaaggacagagacaaagtcaagtccctcttccgtcgttccatgtccctgagcagcttg gtgtcccccgcctcggccccgctgcggggggagcgctgggcggagagcgcagatcggctg gaggggtcccaggccgatgtggacgaggacagggagaacacattgtcctcatccccatcc acatccatctccatgtccatcctccaccttaatcctcccaccactccaccatgcagccac gtcaccatcacaacctctgacaccaccgacactgttccagatgtttctgagctctgggtg acagacaaggattcaaatgatagcgctgtgccatctggatttgaggacaacgacgagctg cagaattacgggctaaatggcgtccagagtcgagcccaaagtgagagcagcggtgagttc agcatgagcatagagaatgagccatggtcaaacggcagcagccccatccagcagcccccg tcacgccgctcctcctcctcctcctccttccagccccccagcgatacctccaccccccag cacacactgaggcagcagcacaaggagaaagcctccaccatgcccatcgcccattcggaa acgcagtctactccaaaacaaaaaagccacgggctctctcaggacttctggctcacacgg ggtacaaagagcatccggagggggtcgagggtgaaagtgacgcgtcgctcttcagataca gtgggcacagtcaaagtgaacccaggatgcaatggggtgaattcaaaatcgagctccagc aaagttgaaactacccgagccttggcttgttcacctatcacagtgctgtatgttcagggc aagtcatcctcaatgtccggctgcctcaactgcttctccacccctctggggaaagagggc agactgagggggtcgcccacatgtctcccacgagccagcagcgtcatttccacagcagag gggtcgtctcgacgctccagtgtaaacagcgactgcagggcgaaggctgacctgctgtcc gtacaggtttcagaggagagccatcaggaggaagaaccaggtcaactcgaactagagaca aaaaacagtgagcccattcctccagtcaaacctcccagagacccaaccgctgttgtcccc acagatgaacccaaaccccccgtgcaggagtcacttctgggctcctcgttcactttcaac tctgtcttctctaacacaatattcagcgattctgtggttccaaccatgagcagtctggat gccctggacaacaaccagacaatcctcggtctgaatccagatctggggcaaaactgtcca cctgagacaacgaaaacgctgcagaacgagcagagactaaatgtaaaacgtgacgctggg ctggagaaggacaagacgctcacggttgcacggaagtag

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