Trematomus bernacchii (emerald rockcod): 117474796
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Entry
117474796 CDS
T09643
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117474796
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117474796
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117474796
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117474796
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117474796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
117474796
NCBI-ProteinID:
XP_033976692
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MREKEGAMQRLGAVHSSAAQALSLVVLVLQLLTQLPGADSALRYRVAEEGPPDVKIGNVA
ADLGLTAGTGSGDVTFALESGSEFFRIDNVTGELTTGQKRIDREKLPQCQMIFDENECFL
DFEVSVIGPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDR
DFGRNGIDRYELIQDGAAGSSSTRRTAGGNPIARVDGGGDRRGRSGDNGGGPRSTVFELQ
VADIPDGEKQPQLIVKGTLDREQKDSYELILRVRDGGNPPRSSQALLRVSISDVNDNSPQ
FERSTYEAEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWL
SVLHRIDREDVSQLRFTVTARDRGQPPRTDRTTVILAVRDENDNVPVVEIRKIGRIPVRD
GAALVPENVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPMPADESF
DRNKKKYFLHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPIFAQS
VVEVHFAENNSPGERVVTVLASDADSGKNAEMAYSLDPAGNGQFYIDANNGDIRATGVLD
REERERYELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFIFYVKENLLANSPV
GMVTVTDADEGENAELSLFVEMDGVDEKKSVEKVEGEDSEKEQEDMFSIDNNTGTIFSSA
SFDRETLSSYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPSNESYTLLPPASS
ARTIVRTVTAIDSDTGPNADLHYDLVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLV
IRVNDSGAPSLCATALVHVFINESLANATLVDAQGTLRRVTFSVVSQPQDGGCYDSGLED
SETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLPDVALTGKCTRECD
EFGHSDTCWMPVRTSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDHESDSESAGSAGSSE
PGVVVSGEGQRLPLVNGDPLGTLGSADRNRNMGDHNRNLLNRKMTSASYDTFSSAGFGRR
QQDEEGGEGQNPTEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagaaggaaggcgccatgcagaggcttggtgcagtgcactcctccgcggcgcag
gctctcagcctcgtggtgttagtgctgcagctgctgactcagctaccgggtgccgactca
gctctccggtaccgagtagcggaggagggcccacctgacgtcaagattggcaacgtggcc
gccgacctggggctcacagcaggtacaggaagcggggacgtcaccttcgccttggagagt
ggctcagagttttttaggattgataatgtgacaggtgagctgacaactggccaaaagcgc
atcgacagagagaagctcccacagtgccagatgatatttgatgaaaatgagtgtttcttg
gactttgaggtgtcagttattggaccactgcagagctgggtagacctgtttgaaggtcgt
gttgtcataacagacatcaatgacaacacaccttctttcccctcacctgttctccagctc
tcagttgaggagaatcgccccataggaactctttacctgctgcccacagcaacagacagg
gattttggccgaaatggaattgaccggtatgagctgattcaagatggtgctgctgggtca
agttcaacaagacgcacagcaggaggaaaccccattgcgagagtggatggaggtggcgac
cggaggggtagaagtggagataatggaggaggaccccggagcactgtgtttgaactacaa
gttgcagacataccagatggggaaaaacaaccacagctaattgtgaaaggcactttggat
cgtgagcagaaagactcatatgagctcatcctcagggttcgagatggtggaaacccacca
cgttcctcccaagccctacttcgtgtgtccatcagtgatgtgaatgacaacagcccacag
tttgagaggtccacatatgaggcagaaatggcagaaaacgctcctccaggtacacctgtc
cttcaggtcagagcttcagaccgcgacattggagtcaatgggcaagttgagtatgtcttt
ggagcggccactgaatccgtcaggcgactccttcggctggacgaggccactggatggctg
agcgtccttcacaggattgacagggaagatgtgtctcaactgaggttcacagtaacagcc
agagaccgaggtcagccaccccgcactgaccgcaccactgtgatcttggctgtccgggac
gaaaatgacaatgtcccagtggtggagatccgaaagattggacggatccctgttagagat
ggagcagcgttagttccagagaacgttctggtggacacaccagtagctttggtacaggtg
tcagaccgagaccagggagagaatggagctgtgacgtgcacagtcgtaggagacgtccca
ttcacattgaagccagctggtgaaacagcactcccacccatgcctgcagatgaatccttt
gacaggaataagaaaaaatacttcttacatacttctgccttgctggactatgaggccacc
aaagagtacagtgttaccattgtggcagtagattctggcagccccagtctgtcaagcaac
agttcactgatggtgcgtgtagtagatatcaatgaccatgcccccatctttgcccagagc
gttgtggaagtccactttgctgagaacaactcacctggtgaaagagtagtcacagtgtta
gcctcagatgcagacagcggcaagaatgctgagatggcatactccctggaccctgctggt
aacgggcaattttacatagatgcaaataatggagatatccgtgccacaggggttcttgac
cgtgaggagcgagagaggtatgaacttcgagtgattgccaaggacaagggtacaccttca
ctgcaaggctccgcaacagttgttgttcaggtgaccgaccgcaacgacaatgctccaaag
tttgttcaggaaatctttatattctacgtgaaagagaatctgcttgccaacagcccggtt
ggcatggtcaccgtgacagatgctgatgaaggcgagaacgcagaacttagtctgtttgta
gaaatggatggagttgatgagaagaagtcagtggagaaggtggaaggagaagatagtgag
aaagagcaggaagacatgttttccattgacaacaacacaggaactatcttttcttctgca
tcgtttgaccgtgaaacgctttcctcctacaccttccgtgtccgggctgtggatggaggt
gagccccggaaaactgccaccgccactgtctcgctctttgtgacagatgaaaatgacaac
gccccctcaatcacctctccatccaatgagtcctacactctccttccacccgccagcagt
gcccgtaccatagtcaggactgtaactgccatagactcagacactggcccaaatgcagac
cttcactatgatctggtggggggaaatcccttccgactgtttgagattggccacactaat
ggagtgattacactggcagaacctctggagcggcgccacagaggtctgcaccgcctggtg
atccgggtcaatgatagtggagcgccctccctctgtgccaccgccctggttcatgtcttc
atcaacgagagcttggccaacgcaacccttgtggatgcacaggggacccttcgccgggtg
accttctctgtagtcagccagccccaggacggaggttgctatgacagtggcctggaagac
tcggagaccccgagcagcaagagttcatcagggccgagactgggagccctgcctctgccc
gaggaaggctacgagcggaccacaccggaaggtagtgtgggcgaagaagagcacgtggaa
aatgatgccagacagctgccagacgtagccctgacaggaaagtgtaccagggagtgtgat
gagttcggccactctgacacttgttggatgcctgttcgcacttcgcctcgccagcgccag
cgccatggcagcgaccccccacggctctccactttcgcccctggtgacgataataacaat
ctccgtggtaacgaccatgagagcgacagcgagagtgctggcagtgcggggagctcagaa
cccggggtggtggtcagtggagaaggtcagagattacccttagtcaacggggatcctctc
ggcaccctgggtagtgcagaccgcaacaggaacatgggcgatcacaaccgtaatcttctg
aaccgcaagatgacttcggcatcctatgacacatttagcagtgcaggctttgggaggcgc
cagcaggacgaggaaggaggagaaggccagaacccaactgaggtcattcccctgacgcgg
acaggaggggactacaagaccacgtcctgcctcacgttgtcacgccgagaggtctacctg
tga
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