Trematomus bernacchii (emerald rockcod): 117474947
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Entry
117474947 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117474947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117474947
03021 Transcription machinery [BR:
tben03021
]
117474947
03036 Chromosome and associated proteins [BR:
tben03036
]
117474947
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
ARID
117474947
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117474947
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117474947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
Kunitz_BPTI
ARID
Motif
Other DBs
NCBI-GeneID:
117474947
NCBI-ProteinID:
XP_033976873
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MPEAVHLGDLLRIWVRPGARFTPSPPDFQGPAQQQQQSPYQRFPPPPQELSQDSFSSQSS
APPSNQPMASNKSSQEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQ
SNPAQSPFSPHTSPHLPGLRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQS
DSIMHSSPMNQSAMGQERVYMRNPQMPPHGSPGQPGSALSPRQSSGGQMHAGMGPYPQNN
SMGNYGPQGVQYGPQGYPRQPGYTGMPNANYPTGPGPDRIMSGSMNPMPGQGXGGAPYGG
IPPGRLGPGQMGPRPFGPGMAANMAGMPPQVASGMCPPPGMNRKDGGPSMHHGPTNSIHN
RPPGYPNMSQGMMGTGSPYGPGMNSMHGMMNQGGPGPGPYPMGTNIPNNSPGMPPSTEFA
MEKMNPAQKINNKVEGTPKPETTTTTPTTTKKKSSSSTLTNEKITRLYELGPEPERKMWV
DRFLAFAEEKAMGMNNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELSTNLNVGT
SSSAASSLKKQYIQCLYAFECKIERGEDPPADFFNTDSKKNPPKAQPPSPAGSGSLQGPQ
TPQSTSSSMAEGGDLKPPTPASTPQLPPMPGARSSVSLQDPFADGGDPAFSRRNALTPNS
QGYQPGMGGPEMIARMGPYETNKDPFGGMRKAGEQFMQPGPNSGMGEQYNRGPPGPMGNM
QMGQRQQYPYGYDRRQEPGMGPEGSMGPGAPQPNMMPSGAETGMYSPSRPPPQQRHESYT
NQYPGQGAPPGGPYPNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGEMYNYSGQPGPQPS
GPPGQQEMYNQYNAYPGGERRPPGPQNQFPFPFGRERVPSSSGPNSQSPMPPQMMASAMP
SGPEGPQGPMWQGRNEMGYNYPNRQGAGQNPGYHGMNRSEEMMPGDQRMNHDGGQWPGHQ
RQPPFGPGGSGPPMTRPLPSTYQTSQNHIPQGSSPTPMPRPMESRTSPSKSPYMHPGIKV
QKAGPPIPASHIGHAPVQQPMIRRDVAFPPGSVEASQPHLKPRRRLTVKEIGTPEAWRVM
MSLKSGLLAESTWALDTINILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIFGILKE
YEVGDPGQRTLIDPNAAEDHVDENPISEEMDVDEEDEEDEDEEEYHYVYEDEEADKEDEY
EKESRKMPESQDEDKTLQEVKAVCILEAETGPCRASMPRWHFDLSQRKCVRFIYGGCAGN
RNNFESEEYCMAVCKRLTMSPTPQPTDDVDIYFETPADDKEHSRFQRAKEQLEIRHRNRM
ERVRKEWEEADRQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLN
DRRRLALENYLAALQADPPRPHRILQALRRYVRAENKDRQHTIRHYQHVLAVDPEKAAQM
KSQVTTHLRVIDERMNQSLSLLYKVPYVAEEIQDEIDELLQEQKA
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggctgttcaccttggagacctgctgcggatatgggtacggcctggcgcgaga
tttacaccttctcccccggattttcaagggccagcacaacaacaacaacagtctccatat
cagaggttcccccctcctccacaggagctttcccaggactcgttcagctctcagtcgagc
gctcctccttccaaccagcccatggcttccaataaaagcagccaggaggacagcatgcag
gggcggccctccagtctgcccgatctttcgggctccatagacgacctccccaccggcacc
gagggggctctgagtccaggggtcagcacttcaggtgtttccagcagtcagggagaacag
agcaacccggcccagtctcccttctctccgcacacctctcctcacctgccgggcctcaga
ggaccctccccctcacctgtgggctcacctgccagcgtcaccccgtcccgaaccggaccc
ctctcccccgctgctgtgccaggtaatcagatgcctccacggccgcccagcgttcagtca
gacagcatcatgcactcctctcccatgaaccagtcagccatgggccaggaaagggtgtac
atgcgtaaccctcagatgcctccgcacgggtccccgggacagcctggctccgccttatct
ccacgccagtcttctggaggccagatgcatgctgggatgggaccatatccccagaacaac
tccatgggaaactacgggcctcagggggtccagtacggtccgcaaggttacccccggcag
cccggatacacaggcatgcccaacgctaactaccccacaggtccggggcctgatagaatt
atgagcggctccatgaaccccatgcctggtcagggtnnggggggggctccgtacggaggc
atcccacccggtagattaggccccggacagatgggtccccggccttttggccccgggatg
gcagcaaacatggccggcatgcctcctcaggtggcgtctgggatgtgtccgcctccaggc
atgaacaggaaggacggaggaccctcgatgcaccacggaccaacaaactccatacacaac
aggccacctggatatccgaacatgtcccaaggcatgatgggaacaggatctccgtacggg
ccgggtatgaacagcatgcatgggatgatgaaccagggagggccagggccagggccgtat
ccaatgggaacaaacatacccaacaacagtcctggaatgcctcccagtacggagtttgcc
atggagaaaatgaaccctgctcagaagatcaacaacaaagtggaggggactcccaagccc
gaaacaacaacaacaacaccaacaacaacaaaaaagaagtcgagctcttccaccctcact
aacgaaaagatcacccgtctgtatgagctcggcccggagccggagaggaagatgtgggtc
gatcgatttctggctttcgcggaggaaaaggcgatgggaatgaacaaccttcctgctgtg
ggacgcaaacctctggacctctacagactctacgtgtccgtcaaagagatcggaggcctc
acacaggtgaacaagaacaagaagtggagagagctgtctaccaacctgaacgtgggaaca
tcgagcagcgctgccagctcgctaaagaaacagtacatccagtgtttgtacgccttcgag
tgcaagatcgagcgcggcgaagacccgccagcggactttttcaacaccgactccaaaaag
aacccgcccaaggcccagccccccagcccagctggctctggatccctgcagggcccccag
actcctcagtccaccagcagctccatggcagaggggggagacctgaagcccccgaccccc
gcctccaccccccagctgcctccaatgcccggagccaggagtagtgtgagtctgcaggac
ccttttgctgacggaggagaccccgctttctccaggagaaacgctctgacccccaattca
cagggctatcaacccggcatggggggccccgagatgattgctcgaatgggcccctacgaa
acaaacaaagacccctttggtggtatgaggaaagctggagagcagttcatgcagccgggg
cccaacagtgggatgggagagcagtataacagaggccccccaggaccaatggggaacatg
cagatgggccagagacaacagtacccttatggatatgacagaagacaggagccaggcatg
ggccctgaaggcagcatgggccccggagcccctcagcccaacatgatgccttcaggagcc
gaaactgggatgtactcgcccagccgccccccaccacagcaacggcatgagtcctacacc
aatcagtatccaggccaaggagcgccccctggtggcccgtaccccaatcagcagccagga
atgtatcctcagcagcagccgaactacaagcgtccagtagacgggggttacggccctcct
gcgaagcgccacgagggggaaatgtacaactacagcggtcagccgggcccccagccctcg
gggcccccgggccaacaggagatgtacaaccagtacaacgcgtatcctggaggagaacga
agacccccaggtccccagaaccagttccctttccccttcggacgagagcgcgtcccctcg
tcttcagggccaaactcccagtctcccatgcctcctcagatgatggcgagcgccatgcca
tcgggccccgaaggcccccagggtcccatgtggcagggacgcaacgaaatgggttataat
tacccaaatcgacaaggagcgggtcaaaaccccgggtatcacggcatgaatcgctcagag
gaaatgatgccaggggaccaacggatgaatcacgatggtggtcagtggccgggtcatcag
aggcagcctccttttggccccgggggctccggaccccccatgacacgccccctaccgtcc
acctatcagacctctcagaaccacattcctcaggggagcagtccaacgccaatgccacga
cccatggagagtaggacgtcgccaagcaagtctccgtacatgcacccgggcatcaaagta
cagaaagcaggacccccgatacccgcctctcacattggacacgcccccgttcagcagccg
atgatccggagagacgtggctttcccccccggatctgtggaagcatcgcagccacatctg
aagccccgaaggagactcaccgtcaaagaaatcggcactcctgaggcctggagagtgatg
atgtctctaaagtcaggattactggctgagagcacctgggctctggacaccatcaacatc
ctgctgtacgacgacaacagcatcactactttcaacctgtgccagctgccgggcttcctg
gagctggtggtggaatatttcagacgctgcctcatcgagatcttcggcatcttaaaggag
tacgaagtgggcgaccccggccagcgaacactcatcgacccaaacgccgccgaggaccac
gtggacgaaaacccaatctccgaggaaatggacgtggacgaagaagacgaggaagacgag
gacgaggaggagtaccactacgtctatgaggacgaggaggcagacaaggaggacgagtat
gagaaggagagccgcaaaatgccagagagccaggacgaggacaagactctgcaggaagtg
aaagcggtgtgcatcctggaggctgagaccggcccctgccgagcctccatgccccgctgg
cacttcgacttgagccagaggaagtgtgtgcgcttcatttacgggggctgtgccggcaac
cgcaacaatttcgaatcagaggagtactgcatggccgtgtgcaagcgcctgaccatgtca
ccaacccctcagcccactgatgatgtggacatctactttgagacccccgctgacgacaag
gagcacagtcgcttccagagggccaaggagcagctggagatcaggcaccgcaaccgcatg
gagagggtgaggaaagagtgggaggaagctgatcgtcaggctaagaacttgcccaaggct
gagcggcagacattgattcagcacttccaagccatggtggagtccctggaggaggaggca
gccagcgagaagcagcagctggtagagactcacctggcccgggtggaggccatgctgaac
gaccggcgccgtctggccctggagaactacctggctgccctgcaggccgacccccccagg
ccccaccgcatcctgcaggccctgagacgctacgtgcgcgccgagaacaaagaccgccag
cacaccatccgccactaccagcacgtcctggctgtggatcctgagaaggctgctcagatg
aagtcccaggtgacgacccacctgcgtgtgatcgatgagcggatgaaccagagtctatct
ctcctctacaaagtaccttatgttgccgaggagattcaggatgaaattgacgagcttctc
caggagcagaaagcc
DBGET
integrated database retrieval system
