Trematomus bernacchii (emerald rockcod): 117474968
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Entry
117474968 CDS
T09643
Symbol
frmpd3
Name
(RefSeq) FERM and PDZ domain-containing protein 3
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117474968 (frmpd3)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
FERM domain-containing proteins
117474968 (frmpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
FERM_C_FAK1
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117474968
NCBI-ProteinID:
XP_033976903
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
MAKVQDGHTNACDSSAMLEESQHGTDSGTLSPASARQVTIQRHPTQGFGFVAGSQRPVIV
RSVSADGPSFGKLLPGDQILAINEETVSDAPRERVIDLVRRCKDTILLAVLQPHQSPKSA
FISAAKKARLRTNPPKVRFSEQVSISDPDSTMLKDDSLLLIPNVLKVFLENGQIKSFTFD
SRTTVRDVISSLQDRLSLRYIEHFALVLEAGGLDQNQRLHLLQDNQPLTHVVHRTYFQGM
KCLFRICFFPKDPADLLRRDPTAFEYLYIQSRNDVIKERFGMDWKSDITLRLAALHIYIT
VSSARPNQKISLKHVEKEWGLEPFLPLTLLPTVKEKNVCKSLSQLLKTYQHPPPSGNKVP
PLQGKLQYMRVLNDLPPFGGILFHTVGLDEKQSATSLLVGPRHGISHVIDLKNNLTTVLT
EFSRVAKVQLYRENQGVARVEVTIHEAKPLVLLMEWPEASNFACLISGYFKLFVDPKRTI
YFRTPGQSQLTKADYRSSHHAHPRSVATSLPSGGRRGDERESSHREPGSSRALLPAEPQH
LGLCHVHLREHQQFQELQIHAEAELDINENFISHEPPGRPRTKSDPTQQSPEEISEVLES
PVGENAGFRIRSQTMSQSQKASRYFCDSCKARHKAEGLSPAVNSSGSSGKHCSSACASRD
GGAVDLIHLPPPGNEEEDEAECVGEKLQQPPPAIAAPPPGFRDNSSDEDDQKRGRRARAS
AGPGVASGKPAQTKEDVPVTLIDNVATRTVRDHAQELDDALVSTLQALEALAASEDFPHH
PQQPTQTAGLIVLAAITPESSLDSGHETNSSELTDVSEMMTAMKQNHNQAYLLAHHINKE
RILCRRDFPLAIPGCTAKTIGTGAFSVAQIRAGCPPKQVILSKTVPFKASTSKDSAVLSV
MTEQGGNQETQTEQKAEKKARSESTKANTPDCPSKSPEELKVSSSSLTAQVSKDQKLSNS
SGETLSQKLSEGTRVKTTASLSTDPSNKALPTLLPVDRTASAKISPTNMCQDAKTASIET
MKPSSSTELLTVDDLFCTCPMQQEPGHQLRLKDPQVQKIVVFQSSSPTDDERLRAKGLQL
AVSKENSVRVGADASLAKPSPQIQTKYSPRLPVKAEKKEAIESKTEGAQGKSHPESQKCP
IKSLPILDDLTTPSPFVDKVSTLPARESKKHSSGKGKSQRSAPFLSFKNLLSATFPARMR
RETDERRAQLQKVRQYELEFLEELLKPKSSQGEFLPQGSSPVPSGTPCACQLRTSPVLKA
PGISREQRRSCDCKRMCRGMRLPDTPVGSTTETQHRGRERPISKTPPAVSEVPHTQGAPR
RPQTLEIKTTRIRSTSLESREPRGEQGSCLPTCTSQTDCIGAPQYKKLQRRYSIGELDNS
TNTPVYAEVRPKAKSLEKEMERVRATGLRLPTPVEPVHTQSHQSEGKGKKGVFFIQGEEL
LRESKEGTSEVLLTMPSEDSDDKDKCCSFCFCYRKCEAADESSEKDELSYSIPLQVLPGM
ELDSRTFPVVSKTLQVLNAEDCSAEEEEVEEEEEEEEELHNQEIDLRACVTLEGSLARVQ
ALQGESFSLPDGFLNAQLDANELLAILRQCGNSPQAEGEARLQPSQIAEYKQELAVRFKE
FRASCRRVASVEKSPTRMLAVVTSSFQVLCELTQTFIKLVRGVRSETQRLQLLRKVEEVA
INYTLLLRAAEESMGHSSSLPTKTVSTPVSSNTNNMSSLARPIKTLPAQ
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtccaggatggacacacgaacgcatgtgacagctctgcaatgttagaggag
agccaacatggtacggacagtggtaccctgagtcctgcctcagctcgacaggtcaccata
cagcgccacccgacccaaggcttcggcttcgttgcaggcagccagaggcctgtcattgta
cgctccgtctctgcagacgggccctcctttggcaagcttctcccaggagaccagatcttg
gccattaacgaagagacggtgagcgacgcgccccgagagagagtcatagaccttgtaaga
cgctgcaaagacactatacttctcgctgtgctgcagccccatcagtcacctaagtctgcc
ttcataagtgcagccaaaaaggcccgcctgcgaaccaacccgcctaaagtgcgcttttca
gagcaagtgtccatcagcgacccagactcaacaatgctcaaggacgactccttgctactc
ataccaaatgtgttgaaggtgttcttggagaatggacagattaagtcctttacatttgat
agccgaaccactgttagggatgtgatctcctccctgcaggaccgcctctctctgcgctac
atcgagcactttgccttggtgctggaggccggtggtcttgaccagaatcagaggttgcat
ctgctgcaggacaaccagcctctgacacatgtggtgcatagaacatacttccaagggatg
aagtgtctgttccgcatctgcttcttccccaaggaccctgcagacctcctgagaagagat
cccactgcgtttgagtacctctatatacagagtcgaaatgacgtcatcaaggagcgcttc
ggcatggactggaaatctgacatcacgttacgattggctgccctccatatctacatcact
gtgtcctccgcgcggcccaatcagaagatctctctcaagcatgttgagaaagagtgggga
ctagagcctttcctgccccttactttgcttccaacggtcaaagagaaaaatgtgtgcaag
agcctgtctcagttgctaaagacctatcagcatcctccaccatcaggcaacaaggtccct
cctctccaaggaaagctgcagtacatgcgtgtgctcaacgacctcccgccttttggtgga
atactgttccacactgttggactggatgagaaacaatcagcaacatcactactggtgggt
cctcgacatggcattagtcatgttattgacctgaaaaacaacctaacgacagttctgact
gagtttagtagggttgccaaggtccagctctaccgagagaaccagggagtggctcgtgtg
gaggtgacaatccatgaggccaagcccctggtcctactcatggaatggcctgaagccagt
aactttgcatgcctgatctctggctacttcaagctgtttgtagaccctaaacggaccatc
tacttcaggactcctggtcagtctcagctgaccaaagcagattacagaagctcccaccat
gctcacccacgttctgtggctaccagcctgccaagtggagggcggcgaggggatgagagg
gaaagctcacacagggagcctgggtcttcaagggccctacttccggccgagcctcagcat
ctaggcctgtgtcacgtccaccttcgagaacatcaacaatttcaagagctccaaatacat
gccgaagctgaactggacataaatgaaaactttatttcccatgagccccctgggcggcct
cgcaccaagtcagacccaacccagcagagtccagaggaaatatcagaggttttagagagc
ccagtaggggagaatgcaggattcagaatacgatcccaaacaatgagtcaatcccagaaa
gcctcacgatacttctgtgactcctgcaaagccaggcataaggccgagggtctgtcacca
gcagtgaacagcagcgggagctcggggaaacactgctccagtgcttgtgcctccagagat
ggaggtgctgttgaccttatccacttaccacctccagggaatgaagaggaggatgaggct
gaatgcgttggagagaaacttcaacaaccaccacctgctattgctgccccaccacctggc
ttcagggacaacagttcagatgaggatgaccaaaagagagggaggagggctcgagccagt
gccggcccaggggtcgcctctggaaagcccgcacaaaccaaggaagatgtgcctgtgaca
ttaattgataatgtggccacaagaacagtccgagatcatgcccaggagcttgatgatgct
ctagtgtccaccttacaggccctagaggctttggcagcctctgaggacttcccccatcat
cctcaacagcccacacagactgcagggctgattgtcttagctgccatcacacctgagtca
tcattggactcgggacatgagaccaactcatctgaattgacagatgtttctgagatgatg
acggctatgaagcagaaccacaaccaggcctacctgctcgctcaccatatcaacaaagaa
cgtatcctctgccgccgtgactttcccctggctatccctggctgcactgcaaagaccata
ggaactggggccttctctgtggctcagatccgtgctggctgtccacccaagcaagtaatc
ctcagcaagacagttccctttaaagccagtaccagtaaggactctgccgtactcagtgta
atgacagagcagggaggcaaccaagagactcagactgaacagaaagcagaaaagaaagca
cgctctgagtccaccaaagcaaacacccctgattgcccttctaagtcgcctgaagaactt
aaagtctcaagttcttccctgacagctcaagtcagtaaagatcagaagttatcaaattct
tctggggagacactgagccaaaagctttctgagggtacaagggtgaagacgacagcatct
cttagtacagaccctagcaacaaagccttacctaccctcctacccgtggacagaactgcc
tctgcaaagatttctcccactaatatgtgccaagatgccaagactgcctctattgagacc
atgaagccttcaagctctacagaacttttgacagttgacgaccttttctgcacatgccca
atgcaacaagagcctgggcatcaactaagactaaaagacccacaggttcagaagattgtg
gtgtttcaatcctcctcccccacagatgatgagcgtcttcgggccaaaggccttcagctt
gctgtcagcaaagaaaattcagtgagagtaggagcagatgctagtttggcaaaaccaagt
cctcaaattcaaaccaagtactcccctcgtttgcctgttaaggcagagaaaaaagaggcg
attgaaagtaagactgagggtgcccagggcaaatcccaccctgagtcacagaaatgcccc
atcaaatccttacctattttagatgatctaacaacacctagcccatttgtggataaggtc
tctactctcccagccagagagtcaaagaagcatagcagtggtaagggaaagtcccaacgc
agtgcccctttcttgagcttcaagaaccttctttcagctacgttcccagcaagaatgcgg
cgagaaacagatgagcgaagggctcagttgcagaaagtccgccagtatgagctagagttc
ttagaagagctgctgaaacccaagtcatcccagggagaatttttgccccagggatcctca
cctgtgccctcaggcactccttgtgcctgccagctccgcaccagccctgtcctaaaagca
ccaggaatctccagggaacagcgacgcagctgtgactgtaagcgaatgtgtaggggcatg
cgactacctgatacaccagttggatccacaactgagacgcaacacagaggcagagaaaga
cctatttcgaaaacccctccggccgtctccgaagtacctcatacccaaggtgctccaagg
agacctcagaccttagagataaagaccacacgaatacgctctaccagccttgagtcaaga
gagccaagaggagagcagggttcctgcttgcccacttgtacttctcaaacagattgcata
ggagctccacaatataagaagctccagaggcgatatagcattggagagctggataacagc
actaacacacctgtgtatgctgaggtgaggccaaaagccaagagtctagagaaggagatg
gaaagagtgagagccacaggactcaggctccctaccccagtagagccagtccacactcag
tctcaccagtcagaggggaaggggaaaaagggtgtgtttttcattcagggcgaagagcta
ctgcgtgaaagtaaagaagggactagcgaggtgctgctgaccatgcccagtgaagacagt
gatgacaaggataaatgctgctcattttgtttctgctacagaaagtgtgaagcagcagat
gaaagcagtgagaaggatgagctctcatactccataccccttcaggtccttcccggcatg
gagctggactctcgtacctttcctgtagtaagcaaaacgctccaggttcttaatgcagag
gactgcagtgcggaagaagaagaggtggaggaggaggaggaagaagaggaagagctgcat
aaccaagagattgacctgagagcctgtgttacactggaagggagcctggcacgggtacag
gctctacagggggagagtttcagcttgcctgatggtttccttaatgcccagttggatgct
aatgaattgcttgctattctgcgtcagtgtggtaacagcccacaagctgagggagaggct
cgtcttcagccctcacagattgctgagtacaaacaggagctggccgtgcgcttcaaagag
ttcagagcatcttgtcgacgagtggcgagtgttgaaaaaagtccaacacgtatgcttgct
gttgtcacctccagctttcaagtgttatgtgaacttactcagaccttcatcaaattggtc
agaggagttcgttcagaaacccaaaggctacagctgttaagaaaagttgaggaagtagct
atcaactacactttacttttgcgtgcagcagaagaatcaatgggacactcaagcagcttg
ccaacaaagacagtgagcactccagtttcctccaacaccaataacatgagctcactcgct
cgacccatcaaaactctacctgcccagtag
DBGET
integrated database retrieval system
