Trematomus bernacchii (emerald rockcod): 117474981
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Entry
117474981 CDS
T09643
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117474981
04082 Neuroactive ligand signaling
117474981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117474981
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117474981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117474981
NCBI-ProteinID:
XP_033976919
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MWSRESAPPLLLCLLALTALWKTRSVSCDAQSDAFKTNITLFTRILDSLLDGYDNRLRPG
LGDRITEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFSGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTISEVTYAWTLNASDSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVTEKKKERASI
AKKNNAYAVAVANYAPNIAKDSSTLPTIAKGGAMDPNKPRAPDSKMTFNSVSKIDRMSRV
LFPVLFSSFNVVYWATYLSREPDIEGMVPST
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagagagagcgctcctccacttctcctctgcctgctggcgctcactgctctc
tggaaaaccaggtcagtgagctgcgatgcccaatccgatgcctttaaaaccaacatcacc
ctgttcacgcgcatcctggacagcctgctggatggatatgacaaccgtctacggccaggt
cttggagacaggataacagaggtgaagacaaacatctacgtcaccagcttcggaccagtt
tcagacacagacatggagtacaccatcgatgtctttttcaggcaaagctggaaggacgag
aggttgaaatttagcggaccgatgaatatactgccgctcaacaacctgatggccagtaaa
atctggactccggacaccttcttccacaacgggaagaagtctgtggctcataacatgacc
atgcccaataaactgctgaggatcaaagatgatgggaccctgctgtacaccatgaggtta
actgtgcatgcagagtgcccaatgcatctggaggatttccccatggactttcattcctgt
ccactaaaatttggcagctatgcctacacaatctcagaagtgacttatgcttggactcta
aatgcctccgactctgtcgtggtggaaggagaaagctcccgccttaaccagtacgacctg
cttggacaaacggtcggtcaagagactatcaaatcgagcacaggtgaatacactgtgatg
acggctcatttccatctgaagaggaagattggttactttgttatccagacgtacctcccg
tgcatcatgacagtcatcctttcccaagtgtctttctggttgaatagagaatcagtgcca
gccaggactgtgtttggtgtaaccactgttctcacaatgacgacactgagtatcagtgca
aggaactcacttcccaaggttgcctacgccactgccatggactggttcatcgccgtctgc
tacgcctttgtcttctccgctttgatcgagtttgccactgtgaattacttcacaaagcgc
ggctgggcttgggatggaaagagtattgtgactgaaaagaaaaaagagagggcttctatc
gccaagaagaataatgcctacgctgtagcagtggccaactacgcgccaaacatcgccaag
gactccagcacacttccaactatcgccaaaggtggagctatggatcctaacaagcccaga
gcaccagatagcaagatgacattcaacagcgttagcaaaatagacaggatgtcaagggtt
ctgtttccggttctctttagtagcttcaacgttgtgtactgggcgacctacttaagcaga
gaacccgatatagagggcatggtcccctccacttag
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