Trematomus bernacchii (emerald rockcod): 117475043
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Entry
117475043 CDS
T09643
Symbol
gpc3
Name
(RefSeq) glypican-3
KO
K08109
glypican 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117475043 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117475043 (gpc3)
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117475043 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Others
117475043 (gpc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
117475043
NCBI-ProteinID:
XP_033976996
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MAAPSVHSALFLCAFLQLFPLPGGQVPSCQEVRTVFQSLHPSSKWVPETPVSGADLQVCQ
TKGPTCCSKKMEERYQVAARSNMESGLQVVSAQLKRIIIQNAAIFQEAFDLVLRHGRNFT
LAMLKSEFPGLGGGAQSFVGQLFLDMSLYILGSDSSVDHMVAVLYGRLFPLAYRRLLGGT
VSSASEECVRGAWKESAAFGPYPKLMMTRLSRSLLATRVFLQALNLGIEVVNTTDHLRPG
RDCSRALLRLWYCPHCQGLLGPPACRGFCQAVMQGCLGGAAEVQPHWKSYVDGLGKLAGG
MRGEQDIEAVVLRLPSIIKLALKHAVNARSRLTAAVSGMCGTTAQRTSRSVLSPPLQLPA
SSAARNTQPSSPDSDETLAGLRRGFIYDLKGFSSFYSGLGEALCSREPPPANHSLCWNGQ
EMTDRFSGPGLKRSHPGSESRSNKPPEPIISQIIDKLKHINQLLRLVTVSEKRWRARSRV
SGGDGWNDEGEEGFESGDCDDEDECTGVSGLGPPPRRKRLRIFADLADNLAMEDFTFQEQ
LLTPGLASAGVGGASSPAAPLWRGSLIPAFPVALLLLLLRHH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccatcagtgcacagtgcgctctttctgtgcgccttcctccagctgtttccc
ctgcccggaggacaggtgccgagctgccaggaggtgcgcaccgtgttccagtctctgcat
ccgagctccaaatgggtcccagaaacgccggtgtcgggtgccgatctgcaggtctgccaa
accaaaggcccgacatgctgttccaagaaaatggaggagcggtatcaggtagccgcacgc
agcaacatggagtctggtctgcaggttgtcagcgctcaactcaagcgtatcatcatccaa
aacgctgccatatttcaagaggccttcgacctggtgctgcgtcacggccgtaacttcacc
ctggccatgctgaagtcggagttcccgggcctcgggggtggagcccagagcttcgtgggg
cagctcttcctggacatgtcgctgtacatcctgggctcagactcctcagtggaccacatg
gtggcggtgctctacgggcgcctcttccccctggcttaccggcgcctgcttggcggcacc
gtttcctctgcatctgaggagtgtgtgagaggggcctggaaggagtccgcagcatttggc
ccctatcccaaactgatgatgacccgtctgtctcgctccctcctggccactcgggtcttc
ctgcaggcgctgaaccttggcatcgaggttgtgaacaccacggaccacctgcgccccggc
agggactgcagccgggccctgctgaggctgtggtactgcccgcactgccagggcctgctg
gggccgccggcctgcaggggcttctgtcaggccgtgatgcagggctgcctggggggggcg
gccgaggtgcagccccactggaagagctacgtagacgggctggggaagctggccggcgga
atgaggggagagcaggacatcgaggctgttgttcttagactgccttcaatcatcaaactg
gctctcaaacacgctgtgaacgcccgcagccgcctcactgccgcggtgagcgggatgtgt
ggaaccactgctcagcggacctctcgctcagtgttatcaccccctctccagcttcctgcc
tcctctgcagcccgcaacacgcagccctcgtccccggactctgatgagactttggcaggc
ctccgcagggggttcatatacgacttgaagggcttcagctcgttctacagcgggctgggg
gaggccctgtgcagccgcgagcccccgccagcgaaccactccctctgctggaacggccag
gagatgacagacaggttttctgggcctggcttgaagaggtcgcaccccggctctgagtcc
cgaagcaacaaaccccctgagccaatcatcagccagatcattgacaaactcaagcacatc
aaccagctgctgcggctggtgacggtatccgagaagcgctggagagcccggtcgcgggtt
agtggaggggacgggtggaacgacgagggggaagagggattcgagagcggtgactgtgac
gatgaagacgagtgcaccggggtgtcaggcctggggccgcctccgagacgcaagcggtta
cgcatctttgcagacctcgctgataacctggctatggaggacttcaccttccaggagcag
ctgctgacccccggcctggcctcagccggggtcgggggggcctcctcacctgcggctccg
ctgtggaggggctccctgatccccgccttccccgtggcgctcctcctgctcctgctccgt
caccactga
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