Trematomus bernacchii (emerald rockcod): 117475054
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Entry
117475054 CDS
T09643
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117475054 (gabrb2a)
04082 Neuroactive ligand signaling
117475054 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117475054 (gabrb2a)
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117475054 (gabrb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
117475054
NCBI-ProteinID:
XP_033977006
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MGRIRKNHFGILTFSLLVTFAWTQSSKDLKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVKVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADSLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYGLISKNVVFSTGAYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAAVANNEKLRPDPK
WLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTLE
MKNEMGGGGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSRL
RRRASQLKVNIPDLSDVNSIDKWSRVIFPTIFSFFNVVYWLYYVH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggattttgactttctctttactagtgactttt
gcctggactcaaagctccaaagatctcaaagatccgagcaatatgcctctagtaaaagaa
acagtggacagactgatgaaaggatacgacattcggttgaggccagatttcggaggtgcg
ccggtcaaggtggggatgaatatagacatagccagtatagacatggtctcggaagtcaac
atggactacaccttgacgatgtacttccagcaggcttggcgggacaagcgtctgtcctac
tccgagatcgcctacaacctgacgctggataaccgagtggcggattcgctgtgggtgcct
gacacctactttctaaacgacaagaagtccttcgttcacggcgtcaccgtcaagaacaga
atgatccgtctgcacccggacggcacagtgctttatggactcaggatcaccacaactgca
gcctgcatgatggacctgcgccgctaccctctagatgagcagaactgcactctggagatt
gaaagctatggctacacaacagatgatattgagttttactggcgaggtggagacggtgct
gtgtccggggtcgacagaatagagctgccacagttctccattgttgattatggactcatc
tctaagaacgtggtcttctctacaggtgcctacccccgcctgtccctcagcttcaaactg
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactacgatgcctcggctgccagagtggccctgggg
attactacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctcccaaag
atcccctacgtcaaggctattgacatgtacctgatgggctgctttgtgtttgtcttcctg
gccctgctggagtacgccttcgtcaactacatcttcttcggccagggcccccagcgacag
aagaaggcggctgagaaagcagccgtggccaataatgagaagctgagacccgaccccaag
tggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacagagg
gaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcattagga
ctaggcgagcaaagaaataagatgactcccgacgacaacatcctgttcagcaccctggag
atgaagaacgagatgggtggtggcggggatctgtcccggggcctgggggcacccggagac
ccccgcaacaccatgctggcctacgatagctcgacgctgcagtaccgcagggcggccatg
gcccgtcagaactatggccacagcgcgttggagcgccacgcccagaagaagtcccgccta
cgaagacgggcctcccagctcaaggtgaatatcccagacctgtccgacgtgaactctatc
gacaagtggtccagggtgatcttccccaccatcttctccttcttcaacgtcgtctactgg
ctctactacgtccattaa
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