Trematomus bernacchii (emerald rockcod): 117475115
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Entry
117475115 CDS
T09643
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117475115 (rlim)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117475115 (rlim)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117475115 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Trypan_PARP
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117475115
NCBI-ProteinID:
XP_033977119
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MEGSDSAEQSGGGEQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEV
TQDELLSRLQQIKDGPEQPNSTPSAPSTESGVDPVEPPENSEDPANGDSLLDWLNTVRRT
GNTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPHESPQET
PQATSEETPESQEMVANVEPLVVEAEPQVPMETDVVEEPVVEEVAVIVEPEPELEPELDP
EPELEPELEQEPELEQEPELEQEPEQEPEPEPETEQEPEPEPEPELEEVVSQEILGEPLL
STAALLVQPPQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLNLDRLDGLPNPRHA
HSTQGLNPATNAPPVLQVEGSSRTRQHVLSRQSTADVDVQPSRASAEVVPEAQPVGAQEG
EAAAGEGAAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDS
DSDSSDSNRGATTPADLAEALNNPEANPAAAPVADVEEPPVAAGVRARTAETDTEEGVVT
APPASAGRVRPLPPISLAEPSSLPFLRLAHFFLLNDDDEDQPQGLTIEQIDNLSMRNFGE
SDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRSAVLVSANRESV
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagtgccgagcagagcggcggcggggagcagccagagtctcagcgc
aggaggcagctggaccgcctgggcagggaggaggccttctaccagtttgtcaacaatctc
agtgatgaggactatcggctcatgagagacaacaatcttttaggcaccccaggagaggta
acacaggacgaacttttaagtagacttcagcaaatcaaggatggtccagagcagccgaat
agcacccctagtgcccccagtactgaaagtggagtggatccagttgaaccaccagaaaac
tctgaggatcctgcaaatggggatagtctcttagactggctgaacacagtgaggcgcaca
ggcaacacaaccagaactggtcatcgtggaaaccagtcatggcgggccgtgagccagacc
aacccaaacagtggtgatttccgcttcagcctggaaatcagtgtgaaccgcaacctggct
gaacagcaggcagctgctgaaggggagcaggaatctccacacgaatctccacaggaaact
ccgcaggcaacttcagaagaaaccccagagagtcaagaaatggtggctaatgttgaacca
cttgtggtggaggctgaaccacaggtacccatggagacggacgtggtggaagaaccggtt
gtagaggaagtggctgtgatagtcgagccagagccagagctggagccagagctggatccg
gagccggagctggagccagagctggagcaggaaccagagctggagcaggaaccagagctg
gagcaggaaccagagcaggaacctgaacctgaacctgaaacagagcaggaaccagaacct
gaaccagagcctgaactagaagaagttgtttcacaagagattttaggagaacctctcctc
tcaactgccgccctgctggtacaaccaccacaacccccactctctccttctccacgcaga
ggacagcggagagcccgcagccgtagtccagaaccacgcaggaccagggcgcgcacggcc
aggagccgctcccctctcaacctggatcgcctggatggcctcccgaatccacgtcatgct
cacagcactcaaggcctcaaccctgccaccaatgctccccctgtgcttcaagtggagggc
agttcacggactcgacaacacgttctttctaggcaaagcactgctgacgttgatgttcag
ccatctagggctagtgcagaagtggtcccagaggcccaacctgtaggagctcaggaagga
gaagctgctgcaggggaaggggccgcagcagggcgccgtccccctaccattatgcttgat
ctccaggtgcgtcgtgtgcgtccaggcgaatatcggcaaagagacagcattgctagccgc
acccgttcacgctcccagaactcaaacaacacatttctttatgagagtgagcgtggtgga
tttcgcaggactttctcacgctctgagcgtgctggggtgaggacctacgtcagcactatt
cgcatccctatccgaagaatctctgatgcaggtttgggggaggccacctcgatggctctc
caatctatgattaggcaaataatgactggttttggtgaactcggctacctcatggactca
gactccgattcgtcagattcaaaccgtggagccaccacacctgcagatctggctgaagcc
ctcaacaacccggaagccaatcctgctgcggctcctgttgctgatgtggaagaaccccct
gtagctgcaggagtcagagcaaggacagctgagactgatactgaggagggtgttgtcact
gctccccctgcctcagctggcagggttagaccactaccacctatcagcctagcggagccc
agctcattgcctttcttgcggcttgctcacttctttcttctaaatgatgacgatgaggac
cagccccaagggctgaccatagagcagattgacaacctctcaatgcgcaattttggtgag
agtgatgccctgaagacttgcagtgtctgcataacagaatatgcagaaggtaacaagcta
cgtaagttgccctgctctcatgagtaccatgtgcactgcattgatcgctggctatccgaa
aactccacttgccccatctgccgcagtgctgtcttggtgtcagccaacagagagagtgtt
gtgtag
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integrated database retrieval system
