Trematomus bernacchii (emerald rockcod): 117475169
Help
Entry
117475169 CDS
T09643
Symbol
syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117475169 (syvn1)
04120 Ubiquitin mediated proteolysis
117475169 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117475169 (syvn1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117475169 (syvn1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117475169 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
Prok-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117475169
NCBI-ProteinID:
XP_033977207
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATTNNQTPAPAQAPPPAPAAPANAP
AAPPPNVAPGMLPGFPPGVFPFWGPFPAVHPPAAAAAAPGNTNAPQSSTEATQAAGSAAG
SSTADAAAGAAAPGSAIPGFPFSFPPPPFPSAPWMSMPPPPPFVSSMPPPPPSLSQLSED
ELRQLEADGRQGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRAEASTAEASGTN
TTPPSASAEPPAASTSTDSQEKDSSSSEQAEAASSQAADSTSIASDMDTREETEDGAAGG
DGEEDAEPNTSELRRRRLRKLETSSPSSSPPPDN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgaccgccaccagcctggctctgaccggggccgtggtggca
cacgcttacctcctcaaaaaccagttctacccgaccgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacatccaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttcttcggacagctaagggctgcggaaatggagcatctcatcgagcgc
tcctggtacgccgtgaccgagacgtgcctggccttcaccgtgttcagggacgacttctcc
ccgcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgcttccactggctggct
gaggacagggtggactttatggaacggagtccgaacatatcctggatttttcacttccga
gtgttatctctcatgggactgctggctatcctggacttcctgtttgttaaccacgcctgc
cacagcatcatcaccagaggagcctcagtccagctcgtttttggatttgagtacgccatc
ctgatgaccatggtgctgaccaccttcattaagtacctcctgcacaccgtggacctgcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaagtgctgctgtacatcgccttcatgaccatcatgatcaaggtccacaccttc
cctctgtttgccatccggcccatgtatctggctatgaggcagttcaagaaagctgtaaca
gacgctataatgtctcggagagcaatccgcaacatgaatacactataccctgatgctact
cctgaagacctgctggcctctgacaacgtctgcatcatctgccgggaggaaatggtcact
ggagccaagaaactgccttgtaatcacattttccactccagctgcctccgctcctggttc
cagagacagcagacctgcccgacctgtcgtatggacgtcctgcgtgcgaccactaacaat
cagactccagcccccgcccaggctccgccccctgctcctgcagcccccgccaacgccccc
gcagccccgccccccaatgtggccccaggcatgttacctggcttcccccccggcgtcttc
cccttctggggtcccttccctgcagtgcacccccctgctgcagctgccgcagcccccggg
aacaccaacgctcctcagagcagcacagaggccacacaggcagccgggagcgcggccggt
tcgtcgactgcagacgccgcggcaggtgcagctgccccaggatcagccatcccaggcttc
cccttctccttcccccccccccccttcccctctgcaccgtggatgtccatgcctccacct
ccccccttcgtgtcttcgatgcccccccctcccccctccctgtcccagctgtcagaggat
gagctgaggcagctggaggcagacggtcgtcagggtctggaggctcggctgcagtgtctg
cagaacatccacacgctgctggacgccgccatgctcaacatccaccactacctcagcacc
gtggccacactcagtcctccccgggctgaggccagcactgcagaggccagcgggacaaac
accacccccccctctgcttccgctgaaccccccgcagccagcaccagcacagacagccag
gagaaggactccagcagctctgagcaggcggaagcagcttcttctcaggcggccgactct
acatccatcgcctcggacatggacacaagagaggagacggaggatggagcggcagggggg
gatggagaggaggacgcagagcccaacacctcagagctgaggcgccgccgcctccgtaag
ctggagacgtcgtcgccgtcctcctccccgcctccggacaactga
DBGET
integrated database retrieval system
