Trematomus bernacchii (emerald rockcod): 117475180
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Entry
117475180 CDS
T09643
Symbol
gabrp
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117475180 (gabrp)
04082 Neuroactive ligand signaling
117475180 (gabrp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117475180 (gabrp)
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117475180 (gabrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117475180
NCBI-ProteinID:
XP_033977224
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSALLHTLLTLCLTFTQGGCTYSGNHWGEWSDSQLQPTIQKLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWVPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQVCTLQLESWG
YNLQDVVFYWTRGNDSVKGLDILRLAQYSVESYYTSVSEAVYETGQYPKLVLHFALRRNV
LFFILETYVPSILLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALVEYACAHFYTMQNQTIEELHRELLRDFNESNGNGSIPIVRF
IQPKHTVQMSSTAEEPLEQAVDCDTRNHAGAREKLSDQGCGLSSVRSASRRAAAAFTVEN
PHNIDRHSRTAFPLAFLCVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctctgctgcacacgctactgaccctctgcctgaccttcacacagggtggttgt
acgtactctggcaatcactggggcgaatggagcgactctcagctgcagccgacaattcag
aagctgatgaaaggatacaaccgctacctcaggcctaatttcaatgagggtcctgtggaa
attggaatgagtctagacatcgccagcattgacgccatctctgaaatcaacatggactac
actgcaaccatcttcctccgtcagcgctggcgtgactcccgcctggtgttcccggggaat
gagagcgtcagcgtggacggacgcctcgtgtccctgctgtgggtccctgacaccttcatc
cccgactccaagcgctccttcctgcatgacgtcacagtggaaaaccgcctcatccgcatc
ttcagcaacgggaccgttctctacgccctacgcatcacagctaccatcgcctgcaacatg
gacctgaccaagtaccccatggacagacaggtgtgcaccctgcagctggagagctggggc
tacaacctgcaggacgtggtgttctattggaccagagggaatgattcggtgaagggtctc
gacatactgcggctggctcagtacagcgtagagagctactatacctcagtgtccgaggct
gtgtatgagacaggacaataccctaagctggtgttgcatttcgcactgcgtaggaacgtg
ctgttctttatcctggagacgtacgtcccctccatcctgctggtggtcctctcctgggtc
tcattctggatcagccagtcctctgtcccagccaggacctgcatcggagtaacaacagtc
ctgaccatgaccacactgatgatgggcgcccgcacatccctgcccaatgccaactgcttc
atcaaggccatcgatgtgtacctgggcatctgcttcaccttcatctttggtgctctggtg
gagtacgcctgtgcacacttctataccatgcagaaccagactatagaggaattacacagg
gagcttctgagggatttcaatgaatccaacggaaacggctccatccccatcgtccgcttc
atccagccgaaacacactgtgcagatgagctccactgcagaggagcccctggagcaggca
gtggactgcgacacgaggaaccatgctggggccagagagaaactgtcggatcagggctgc
ggtctgtcctcagtgaggagcgcttcacgcagagccgcggccgccttcacggtggaaaat
ccacacaacatcgaccgccactctcgcaccgctttccccttggcgttcctctgtgtcaat
atcctctactggctttactatctgttcctctga
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