Trematomus bernacchii (emerald rockcod): 117475217
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Entry
117475217 CDS
T09643
Symbol
pdlim7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117475217 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117475217 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117475217 (pdlim7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
SIR2
Motif
Other DBs
NCBI-GeneID:
117475217
NCBI-ProteinID:
XP_033977274
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSGEHIEGQEAMNIYSVNLSGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDW
VVSISDTNAEDMTHVEAQNQIRAATDSLTLTLSKAFKAGDQKDSLAPASVPPKYSFAPST
TINKMARPFTAGGAGGGTANSGPAIKPVAYSPKLNTPSSQGRASVKQPQNGLEPTPSPAK
AQAADKPDGTKTAAAPARSSGPSSRPPWVTDPNFADRFRPDKTSTVVTQHQQPAQPTPMQ
NRSSILQAAQQAPEESGRTPLCGXCNKIIRGRYLVALGRSWHPEEFTCSQCKVVLEEGGF
FEERGSVYCTKCHDNRYAPNCAKCKKKITGEIMHALKMTYHVECFKCAACKTAIRNQAFY
MEEGEPYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTF
YSKKDKPLCKGHAFAPV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaacacatcgaaggacaagaggctatgaacatatactctgtaaacctcagc
ggcccggcgccttggggcttcaggctgcagggtggcaaggacttcagcatgcccctcacc
gtgtctaggctgaccccgggtgggaaggcagctcaggctggtgtcggtgtgggagactgg
gtggtgtccatcagcgacactaatgcagaggacatgacccatgtggaggcacaaaaccag
atcagagcagcaacagactccctcaccctcaccctcagcaaagcttttaaagcgggagac
cagaaggactcacttgctccggcttctgttccgccaaagtactcctttgctcccagcaca
accattaacaagatggcgaggccatttacagcaggtggtgctggtggtggtactgccaac
tcaggacccgctattaaacctgtggcatactcccctaaacttaacaccccgagctctcag
ggccgtgccagtgtgaagcagccacagaatggccttgagccaactccctcacctgccaag
gcccaggcagcagacaaaccagatggcactaagactgcagcggccccagcacgcagctcg
ggtccctcctctcgacccccgtgggtcactgaccctaattttgctgaccgcttccggcca
gataagaccagcaccgtggtgacccagcaccagcagccggcccagcccactcccatgcag
aaccgcagctccatcctgcaggcagcgcagcaggcgcccgaagagagcggcaggaccccg
ctctgtgggncctgcaacaaaatcataaggggtcggtacctggtggcgttgggccgttcc
tggcacccggaggagtttacgtgttcgcagtgtaaggtggtcctggaggagggcggcttc
ttcgaggagagagggtctgtctactgcaccaagtgccacgacaaccgatacgctcccaac
tgcgccaagtgcaaaaagaagatcaccggggaaatcatgcatgccctgaagatgacctac
catgttgagtgtttcaagtgtgcagcctgcaagactgccatcaggaaccaagccttttac
atggaggagggagaaccctactgtgagaaagactatgagaagatgtttggcaccaaatgc
cacggctgtgactttaagattgatgccggcgatcggtttctggaggccttgggctacagc
tggcacgatacgtgcttcgtctgtgctctctgccaaatcaacctggaggggaagacgttc
tactcaaagaaggataagcccctgtgcaaaggccatgccttcgctccagtgtga
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