Trematomus bernacchii (emerald rockcod): 117475234
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Entry
117475234 CDS
T09643
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117475234 (lsm11)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117475234 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
nec1
Motif
Other DBs
NCBI-GeneID:
117475234
NCBI-ProteinID:
XP_033977290
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MEERERKIVKSHSKEPVTATCSSTPSAPERCGKAAGSGADKTDVCSDNFDPLLALYSPTV
SLPFPNIRSFNNVAAYESFLKGGRGRAKPENVEKKRQKAMKGVADPERIERLKKLMVNNP
VTPEGESSAPRRRRHKPVKNVLTRMPLCKGSPLGELYRCVEEKIRVRVHIRTFKGLRGVC
SGFVVAFDKFWNMAMVDVDETYREPLLGEAFYHEKALTISRLFEKLMLQESPGDDEPAKK
HGAQETASKHQPTNPKSAPKTPSAAQPSSRRQDSRTESKLSNAVRIRTDKHKVSPKAQGP
EVCQKKVSQKYGKVHTRHINQLFIRGESVLLVNPQPL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagaaaaattgtaaagtcacacagcaaagaaccggtcactgcaacc
tgttcgagtacaccatcagctccggagcgttgcggtaaagctgcgggcagtggcgcagat
aaaacagatgtctgctcggataacttcgaccctctcttggccttgtactcgcccactgtg
tcgcttccttttccaaatatcagaagctttaacaatgtggcggcttacgagagctttcta
aagggcggccggggcagagccaagccggagaatgtggagaagaagcggcagaaggccatg
aaaggggtggcggacccggagcgcatcgagaggctgaagaagctcatggtgaacaacccg
gtgactccggagggggagagcagcgcaccgcggagaaggaggcacaagccggtgaaaaat
gtcctcacaaggatgcccttgtgtaaaggcagtccattgggggagctgtaccgatgcgtg
gaggagaagatcagggtcagagttcacatcaggaccttcaaggggctgaggggagtctgc
tcgggctttgttgtggccttcgacaagttctggaacatggccatggtggatgtagatgag
acataccgagagcctctgcttggagaggcattttaccatgagaaggccctcaccatttcc
cggctctttgagaagctgatgctccaggagagtccaggagatgatgagccagcaaagaag
cacggagcccaggaaacagccagcaagcatcagcctacaaacccaaaaagtgctccaaaa
accccgtctgctgctcagcctagcagccggagacaggacagcaggacggagtccaaactg
tcaaacgctgttagaatcagaacggataaacacaaagtctcgccgaaggcccaggggcca
gaggtctgccagaagaaagtctcccagaagtatggcaaggtgcacacacgccacatcaac
cagctcttcatccggggggagagcgtcctcctggtcaacccccagccgctctga
DBGET
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