Trematomus bernacchii (emerald rockcod): 117475258
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Entry
117475258 CDS
T09643
Symbol
ints6l
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117475258 (ints6l)
Spliceosome [BR:
tben03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
117475258 (ints6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
VWA_4
VWA
Motif
Other DBs
NCBI-GeneID:
117475258
NCBI-ProteinID:
XP_033977325
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MPILLFLLDTSASMNQRTYLGTTYLDVAKGAVEVFMKLRARDPASRGDRYMLVTFDDPPY
GVKAGWKENHSTFMCELKNLQASGLTTLGHALRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSVIITITDGNKLTHSSGVPDELHLPLNSPLAGSELTKEPFRWDQRLFALVLRLPGAST
PDTEQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKTGP
DPPLIGEENSAEPSRPVSSFSAQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSP
NLPPRSAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQFILERKSPHMCWQVFVSSSG
KPSEMGQPFGYLKASTTLTCVNLFVMPFNYPVLLPLLDDLFKVHKLKPNLKWRQSFEMYL
KTMPPYFLLPLKKALRMMGAPNLIADTMDCGLSYSVISYLKKLSQQAKMESDRLIVSVGK
KAPQETGIKVKNHSTTLSLAHRRDFQQLLQGITGEGPLRLADMNFKEFAGFQIALLNKDL
KPQAYRNAYDIPRRNLLDQLTRMRSNLLRTSQKLIRGQDEDYLHSIPVAQMGNYQEYLKM
MPSPLREIDPDQPKRLHTFGNPFKQDKKGLMIDEADEFVAGPQSKKRGNSNDSNLSTTMK
RRRSMSPLLRRPQTPPVNNNHVPAGKSPAAVQGQQNLIKPIPLHKGEDDNNMLVAESNGD
GEPESGGIWPAEVDAVAETPSSPLSLEEKTEPGAADETEDVDMMEDRLEDRLEGRLEDRL
EDRLEDRLEGRLEGRLEGRLEGRLEDTLEEDSLDEEVERLNCDRLSPQSQMEDPEEDPEA
DPETLQPIFIAPLDGSQAELKSQIIKEVRKPGRNHESILGLLQQVKGPVDVQKYFIQHAI
REAARFKKRVLIQQLETSLAELGEKXSAPPELPNDNGSS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttactcttcctgttagacacgtccgcttctatgaatcagcgcacttatttg
ggtacgacgtatctggacgttgctaaaggcgcggttgaggtctttatgaagctgcgtgcc
cgagacccggctagtagaggcgacaggtacatgctagttacattcgatgatccaccatac
ggagtgaaggcgggctggaaagagaaccactccaccttcatgtgcgagctgaagaacctg
caggcgtccggcctcaccacgttagggcacgctctccgcacagccttcgacctgctcaac
ctcaaccgcctcgtctcaggcatcgacaactacggacagggccgtaaccccttcttcctc
gagccatctgtgatcatcaccatcactgatgggaacaagcttacacacagctctggggtg
ccagatgagctgcacctgcctctgaactctccgttggcgggcagcgagctgaccaaggag
cccttccgctgggaccagcgtctgtttgcgttggtgctgcggctgccaggagcgtccaca
ccggacacggagcagctcggcagcgtccccacagacgagtccgccatcacccagatgtgt
gaagtcaccggagggcggtcgtactgtgtgcggactcagaggatgttgaaccagtgtctg
gagtctctggtccaaaaggttcaaagtggtgtcgtcattaattttgagaagacagggccg
gatccgcctctcattggtgaagagaactccgcagagccaagtcgtcccgtgtcttccttc
agcgctcagccgtggcacagctgccacaaactcatctacgtgagaccaaaccccaagacg
ggggtcccggtcgggcactggcccatcccagagtccttctggcccgaccagaactctccc
aacctgcccccccgctctgcccatcctgtggtgcggttctcctgtgtggactgcgagccc
atggtgatcgacaagcttccctttgacaagtacgagctggagccctcccccctcacccag
ttcatcctggagaggaagtctcctcacatgtgctggcaggtgtttgttagcagcagcggg
aagcccagtgagatgggacagcctttcggctacctcaaagccagcaccactctcacctgt
gtcaacctgttcgtcatgccgttcaactaccccgtgctgctccccctgctcgatgattta
ttcaaagtgcacaaactaaaaccaaacctgaagtggagacagtcgttcgagatgtacctg
aagacaatgcctccatacttcctcttgcccttaaagaaggcgctgaggatgatgggtgcc
cctaatctcattgcagacactatggactgcggcctgagttacagtgtcatctcttacctg
aagaagctcagccagcaggcaaagatggaatcagatcgtctcatcgtgtctgtggggaag
aaggctccccaggaaacgggcatcaaggtgaagaaccactccaccacgctctctctggcc
caccggcgggacttccagcagctgctgcagggcatcaccggggagggcccgctgcgcctg
gccgacatgaacttcaaagagttcgctggcttccagatcgccctgctcaacaaggatctc
aaacctcaagcttatcgaaatgcgtacgacatcccgaggcggaatcttctggatcaactc
acgaggatgcgctccaacttgctgcggacgtcgcaaaaactgatccgagggcaagacgaa
gactatctgcacagtatcccggtggctcagatgggaaactatcaggagtatctcaaaatg
atgccgtctcctctgagagagatcgaccccgaccaacctaagcgcctgcacacattcggg
aatcctttcaagcaggacaagaaggggctgatgatcgacgaggcagatgagttcgtagcg
ggccctcaaagcaagaaaagaggaaattccaacgattcaaacttgagtacgacgatgaag
aggaggcggagcatgtccccgttactgcggcgaccgcaaactccaccagtgaacaacaac
cacgtgccggcagggaagagtcctgctgctgttcaagggcagcagaacctcataaaaccc
atcccactgcacaaaggagaggatgacaacaacatgttggtcgctgagagtaacggtgac
ggggagccagagtcgggggggatctggcccgccgaggtggacgctgtagctgagacccct
tcgtctccactgagcctcgaggagaagacggagccgggggcagcagacgagacggaggac
gtagacatgatggaggacagactagaggacagactagagggcagactagaggacagacta
gaggacagactagaggacagactagagggcagactagagggcagactagagggcagacta
gagggcagactagaggacacactagaggaagacagtctagatgaggaggtggagagactc
aactgtgaccgactgagcccccagagccagatggaagaccctgaagaggaccctgaagcg
gaccccgagacgctgcagcccatcttcatcgccccgctggacggcagccaggcggagctg
aagagtcagatcatcaaggaggtccgcaaacctgggagaaaccatgaatcaatactcggt
ctactgcagcaggtgaaaggaccagtggatgttcagaagtacttcatccaacacgctatc
agagaggccgccaggtttaagaagcgggttctgatccagcagctggagacgtccctcgct
gagctgggagagaagncaagcgcccccccagagcttcccaatgataacggcagcagttag
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