Trematomus bernacchii (emerald rockcod): 117475341
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Entry
117475341 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: dynein heavy chain 1, axonemal-like
KO
K10408
dynein axonemal heavy chain
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117475341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117475341
04812 Cytoskeleton proteins [BR:
tben04812
]
117475341
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Dynein arm
117475341
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117475341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_6
DHC_N2
AAA_9
Dynein_C
AAA_lid_11
Dynein_heavy
AAA_5
Dynein_AAA_lid
DUF4058
Motif
Other DBs
NCBI-GeneID:
117475341
NCBI-ProteinID:
XP_033977379
LinkDB
All DBs
Position
Unknown
AA seq
2915 aa
AA seq
DB search
MERKYFPDFGVLVPHPPSKPPEPKPPALSHRHRPAPVRTCAVNEQMGIYSDIITKHKFQS
LTAGPGIMQRSLGRSIVRYCDPNTTKVTTLKTPSDQGKHVEKQNPGPTSQQSQQSQTSYF
PRGGDSPKVQIPYQTARGQVPRKLEIERRRREYLKLDIEQLLAEQGIYSNLLMPTHQSSS
DDHETTTDNPVSPYLSLEVFDNEDFECRNPEDWLALGIAEKSLEQKPIPAKALLPTDDEI
NSDEPQSSSLEYSWRLVAVLDYSKEKCQYLVQKVCQNSQLTDKKGRPILNEEHKKSKSPG
WLXTGTTFWVPRIRLVFSAEDPRVFVKRIQFALRWQENTEALLLYHLSVDCMPTWKGTPS
LDSHALQRIRRITLSAPGLRHKILEKCIGDLEKELKLDYERTMNRMSFDRVVMRHPEEFS
HITLPQKGPAYVPQSGRVPVPTFPYEKYKTAFFFKSLLTKPEVIRVLSEILSECNKVANM
RLFNVTSVKPLRLDEFEVIQAQMHTQVSLFLREGWIVSLSNCIRFNLLSIGRGTYNVDES
QWEMYKMSKLYRLMAVVRYKLQDSMRHLVQASLLRLTLLLLTTCHSVLTCPQDLVWGDDL
VTSPYKSERTPLFLLDLILDQTGVHYSTPLENFKTSMVNLFDKAILATYKVPQLDKFVMQ
KMFVGGDPLLESVNLWEPEVTALREKVSNAMMQGVIPLRAYAAEYEKYLDLHNLDIETLL
KSPANAEQTSQEVKKEVEQHLKDKETLEHSLPSSIVIGTFVIRVEGVRQALSNKKKALAN
AMLAILAEKLSKQVDEACEEYNTISRKLREKLNSIEELSEKREWMKQVPGQLKSYKEVIG
KTLSDYELIEELRYSLSNEDFDKKWTAIRWPQKIISQMEAAAAQHLEDEERFNKIQLADQ
NNFEDHLDSLKMLVAGIACHDDINHAHKVANKVRRTSKQLKDCLTMAQTYNTRERLFGIP
VTNYDRLQKLVKDFQPFTDLWTTTSDWMRWHENWLNDPLSSIDSEQLERNVTDVHKVMNK
CVKHFKDIPGCQMVASAICIKIKDFQPYIPLIQGLRNPGMKNRHWEILSDRIQMKVKPKD
NLTLSRCLELGLQNHIEDIAHVAEVAGKEYTIEQALDKMENEWSTIFFDVLPYKDTGTYI
LKSPDEVSQMLDDHNVMTQSMSFSPFKKSFEARINTWEGKIRMTQDVLEEWLTFQRSWLY
LEPIFSSDDITQQLPVEGKRYQLVDRTWKAVMKSAFKNPKVIELCPDSRLLEKLKRCNEL
LEEVQKGLSEYLETKRGSFPRFYFLSDDELLEILSQTRDPTAVQPHLNLGDLVQLVRGPL
SKMQRAVLSALIVIEVHAKEVAAKLVELQVSSSINDFEWISQLRYYWTKNDLYIRAVNAE
FLYGYEYLGNSGRLVITPLTDRCYLTLTGALHLKFGGAPAGPAGTGKTETTKDLGKALAI
QTVVFNCSDQLDFIAMGKLLKGLASSGAWACFDEFNRIDVEVLSVVAQQITTIQKAQMQR
AERFMFEGAEIPLVQSCAVFITMNPGYAGRTELPDNLKALFRPVAMMVPDYAMIAEISLY
SFGFSDAKILSKKITTTFKLSSEQLSAQDHYDFGMRAVKTVISAAGNLKRENPDMNEELI
CLRAIQDVNVPKFLQDDLKLFNGIVSDLFPKTKQEPIDYGTLEESMRDVCTKKNLKDVDG
FISKCIQLYETTVVRHGLMLVGPSGSGKTKCYEVLGAAITALKGQPSVSGDVYEAIQIYV
LNPKSITMGQLYGEFDLLTHEWTDGILSAVIRAGASSMDTVKKWYMFDGPVDAVWIENMN
TVLDDNKKLCLSSGEIIKLSEVMTMMFEVQDLAVASPATVSRCGMVYLEPSVLGLVPFTE
CWLRRVPEALKPFTKQLESLFARFLQDAITFVRTSVKKVITSLDSNLTCSLLKVMDCFFN
PFNIKEGEYRAAMAEEWLQCFKKLNVPHTDEPNLINTFGDPVKIRSWQISGLPKDNLSVE
NGVITQYCLRWPLFIDPQGQANTWIKNIYILSEKDSRLEVIKLSDRDFLRSLENAIRFGK
PCLLENIGEELDPALEPVLLQQTFVLRGSTMLKLGDTVIPYQQGFKMYITTKLPNPHYSP
EVATKVTLINFTLSPSGLEDQLLGQVVAVERPDLEEAKNQLIISNAQMKQELKEIEDEIL
FRLSSTEGNPVDNEELIQVFGASKIKAGEIKAKVVVAEQTEKDIDATRLEYVPVAVRTQI
LFFCVSDLSNVDPMYQYSLEWFLCIFMAGLANSEKADTVEERIANINEFFTFSLYSNVCR
SLFEKNKLMFAFLLCARIMMNENKIDMAEWRYLLSGGMPAQELTNPAVSWLSERAWQDIL
GLSALDNFRNLAESFPEHLQGFKSIFDSNQPHRDPLPGQWDTELDSFQKLLVLRCLRADR
LVQGLQDFVSAQLGQRFIEPQTSDLSVVFKESSLSTPLIFVLSPGTDPAADLYKFADVMQ
FSKKMSAISLGQGQGPWAEKLMLAAMERGHWVFSQNCHLAPSWMPSLERLIENISPVKVH
KDFRMWLTSLSSNKFPVSILQNGSKMTIEPPKGIKANLQKTYLRLTNEFFTSSTKASHLK
ALLLSLCLFHGISLERRKFGPLGFNIPYDFTDGDLNICISQVKMFLDEYQDVPYKVLKYT
AGEINYGGRVTDDWDRRCLLSVLEDFYCPAVLEDGHFYSSSGVYRQIDTDLDIKGYLAYI
RGLPINDTPEIFGLHDNANISFAQNESFALLGALVRLQPRASSAGGKSLEEIVEEIVAGI
VEKIPRPFNIQDVMEMFPVLYEESMNTVLIQEVIRYNNLLAVISQSLGDIVKALKGLVVM
SSELELMASSLFINVVPDMWKAKAYPSLKPLASWVSDLILRINFLQKWICDGIPPVFWIS
GFFFPQAFLTGTLQNYARRSGISIDTIGFDFEVRQ
NT seq
8748 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaaatatttcccagatttcggtgtcttggtgcctcatccacccagcaaacct
ccagagcccaagcctccagctctaagtcacaggcacagacccgctccagtcagaacatgc
gctgtgaatgaacagatggggatctactcagatattataactaaacacaagttccagtct
ttaacagcgggaccaggcatcatgcagaggtcactgggacgatccatcgttcggtattgt
gatcccaacactacaaaggttacaaccttaaagactccatctgaccagggcaagcatgtt
gaaaagcaaaaccctggacctacctcacagcaatcacagcaatcccagacttcttacttc
ccccggggtggagattcacccaaggtccagataccttaccaaacagctcgtggccaggtc
ccgcgcaagttagagatagagagacgtcgaagggaatatttgaagttagacattgaacag
ctcctggcagaacaaggcatctattcaaatcttttaatgccaacacatcagagcagcagt
gatgatcatgagactacaacagacaatcctgtttcaccctacttatccctggaagtattt
gacaatgaggactttgaatgccggaatccagaagactggcttgccctgggcattgctgaa
aaatcactggaacaaaaacctatccctgcaaaagctctgctgcctaccgatgatgaaatt
aattctgatgagccacaaagctcctccctggagtacagctggcgtctagtcgctgttctt
gactatagtaaggagaaatgccagtaccttgtacagaaagtttgccagaacagccaactg
acagataaaaaaggtcgtcctattctaaatgaagaacacaaaaagagcaaatctcctggt
tggttgtaaacaggcacaacgttctgggtacccaggatcagattggttttcagtgctgag
gacccacgtgtgtttgtcaaacggatccagtttgccctgcgctggcaggaaaacacagaa
gctctgcttctctatcacctttctgtggactgcatgccaacctggaagggaacaccatct
cttgatagccacgctctccagagaattagaagaatcacgctttcagcccccgggctcaga
cataaaattttggagaagtgtatcggggatctggagaaggagctcaaactggattatgag
cggacaatgaaccgcatgagttttgacagagttgtgatgagacacccagaggagttttca
cacatcaccctgccacagaagggtcctgcatatgtaccccaatcagggcgtgttccagtt
cccacatttccctatgagaagtataaaacagctttcttcttcaagtccctgctaacaaag
ccggaggtgatccgtgtgttatctgaaatcttgtctgagtgcaacaaagtagcaaacatg
aggctgttcaatgtcacctcggtcaaaccactgcgactggacgagtttgaagtcattcag
gctcaaatgcatactcaggtaagcttatttcttagggagggatggatagtctcactgagc
aactgcatccgattcaacctgctgagtattggccgtggcacttacaacgtggacgagtct
caatgggagatgtacaagatgtccaagctgtacagattgatggctgtggtgcgctacaag
ctgcaggactccatgcgccacctggtgcaggcctcgctgctccgcctgactctgctgctg
ttaaccacctgccacagtgtgctgacatgtcctcaggacctggtctggggggacgacctc
gtcactagcccatataagtcagaaaggacccctctgttcctgttggacttgattctggat
cagactggggttcattacagcactccactcgagaactttaagacatccatggtcaacctg
ttcgataaggccattctggccacttacaaagtacctcagctcgataagtttgtaatgcag
aagatgttcgtcggtggggatccgttgcttgagtcagtgaatctttgggaaccagaagta
actgcgctgagagaaaaggtctccaatgctatgatgcaaggagtcatacctctcagggcc
tatgctgctgagtatgagaaatacttagatttacacaacctggacatagaaacccttctc
aaatctcctgcgaatgcagaacagacatcccaggaagtgaaaaaagaggtggaacaacat
ctcaaagacaaggaaacacttgagcactctctgccgtcctccattgtaattggaacattt
gttattcgagtggagggtgtacgtcaggctctctccaacaaaaaaaaggctttagccaat
gcaatgctggccatccttgctgagaagctaagcaagcaggttgatgaagcatgtgaagag
tacaacacaatcagtagaaagctgcgtgagaaactgaacagcattgaagagctgagtgag
aagagggaatggatgaagcaagtcccaggccagctcaagagttacaaggaagttattgga
aagaccctgtcagactatgagctaatagaagagcttcgctactctctttcaaatgaggat
tttgataaaaagtggacagctattagatggcctcaaaagataataagccagatggaagca
gcggccgcccagcatttggaggatgaagagcgcttcaataagattcagctggccgaccag
aacaactttgaggaccacctcgactcgctaaagatgctggttgctgggattgcgtgtcat
gatgacatcaatcatgcccataaggtggccaacaaagtgaggcgtacaagcaagcaactg
aaggactgtctgacaatggctcaaacctacaacaccagagagcgtctgtttggtattcct
gtcactaattatgatcggctacagaagctggtgaaggacttccagccttttacggacctg
tggaccaccacctctgattggatgcgttggcacgagaactggctcaatgacccgctgtct
tccatagactccgagcagctggagcgcaatgttacagatgtccacaaggtcatgaacaaa
tgtgtgaaacacttcaaggacattcctggctgccagatggttgcatcggcgatctgcatc
aagatcaaggacttccagccgtacattcctctgattcagggcctgaggaacccggggatg
aagaaccgccactgggagattctttcagaccgcattcagatgaaggtcaagcccaaagat
aacctcaccctctctcgatgcctggagctgggcctacagaaccacatagaggacatagct
catgtggccgaggtggcagggaaagagtacaccattgaacaggccctggacaagatggaa
aacgagtggtcaacaatattctttgacgtgttgccctacaaggatacaggcacctacatc
ctgaagagcccagatgaagtctcacagatgctggacgaccacaatgtcatgacgcagagc
atgtccttctctcccttcaaaaagtcctttgaggcccgtatcaacacctgggagggcaaa
atcagaatgactcaggacgtgctggaggagtggttgacattccaacgctcctggctttac
ttagagcccatcttcagctcggatgatatcacccagcagctgcctgtggaaggaaagaga
taccagctagtggatagaacgtggaaggcagtcatgaaaagtgcctttaaaaatccaaag
gtgattgagctgtgcccagattctaggctactagaaaaactgaaaaggtgcaacgaactg
ctggaagaggtccagaagggtcttagtgaatacttggaaacaaaaagaggctccttcccc
aggttttacttcctgtcagacgatgaactcctggagattctgtcccagaccagagatcct
actgctgttcaacctcacttgaatctgggcgacttggtgcagctggtgagaggacctctg
tctaagatgcagcgggcggtgctgtctgccctcatcgtcatcgaggtccacgctaaggag
gttgcagccaaactggtggagctgcaggtctccagcagcatcaatgactttgagtggatc
agccagctcagatattactggaccaaaaatgacttgtacatccgggcagtgaatgcagag
tttttgtacggatacgagtaccttggtaactccggacgtctggtcatcaccccgctcact
gacagatgctacctgaccctaacaggagctctacacctgaagttcggaggggctcctgca
ggtccagcagggacagggaagacagaaaccactaaagatctgggaaaggcgctggctatc
cagaccgttgttttcaactgctctgatcagctggacttcattgctatgggcaagcttctc
aaaggactggccagctccggggcctgggcatgctttgatgagtttaatcgtattgatgtg
gaggtgttgtctgttgtggcgcagcagatcaccaccatacaaaaggcccaaatgcaaagg
gcagagcggttcatgtttgagggggcagaaatccctcttgtccagtcctgcgccgtgttc
atcaccatgaatcctgggtacgccggacgcacggagctgcctgacaatctcaaggcactg
tttcgtcccgtggcgatgatggtacctgactacgctatgattgctgagatctccttgtac
tcatttggcttcagtgatgccaaaatcctctccaagaagatcaccaccaccttcaagctc
tcctccgaacagctcagcgctcaggatcattatgacttcggtatgagagcggtgaagact
gtgatctcagctgctggaaacctcaagagagaaaatcctgatatgaacgaggagctgatc
tgtctgcgagccattcaagatgtcaacgtaccaaagtttttacaggacgacctgaagctc
ttcaacggtattgtgtccgatcttttcccaaagacaaaacaggagccaatcgactacggc
acactggaggagtccatgcgtgatgtctgcaccaagaagaacctcaaagatgtggatggg
tttatttctaagtgtattcagctgtatgagaccactgtggtgagacacggcctgatgttg
gtgggaccctctggatccggtaaaaccaagtgttatgaggttctaggtgcggcgataaca
gctctgaagggccagccctctgtgagcggcgatgtgtatgaagcgattcagatatatgtc
ctcaacccaaagtctatcaccatgggacagctctacggggagtttgacctgctcacacac
gagtggacagatggcatcctttccgctgttatccgtgcaggtgcatcatccatggacact
gtgaaaaagtggtatatgtttgatgggccagtggacgcagtttggattgagaacatgaac
actgtgctcgatgacaacaagaaactgtgcctcagctcgggggaaatcatcaagctcagt
gaggtgatgaccatgatgtttgaggtgcaggacttagcggtggcctccccagccacagtg
tctcgctgcgggatggtctacctggagcccagcgttctgggcctcgtccctttcacagag
tgttggctgaggcgagtccctgaagccctgaaaccgttcacaaagcagctcgaatcgctt
tttgccaggttcctccaggacgccatcacatttgtccgcacatcagtaaagaaggtcatc
acatctctggacagcaacctcacctgcagtctgcttaaagttatggactgcttcttcaat
cccttcaacattaaagagggagagtacagggcagccatggcagaggagtggctgcaatgt
ttcaaaaagctaaatgttccacacactgacgaaccaaacctgatcaacaccttcggagac
ccggtcaagatccgctcatggcagatatcaggtctgcccaaggataacctctcagtggag
aacggtgtgatcacccagtactgtctgcgctggcctttattcatcgatcctcagggacaa
gccaacacttggatcaaaaacatatatatcttatctgagaaggacagtagattggaggtc
attaagttaagtgaccgggacttcctccgcagtcttgagaatgccattcgctttgggaaa
ccctgcctcttggagaatataggggaggaattggatcctgccctagagcctgtcttgctg
caacaaacatttgtgctgagaggcagcaccatgctgaagctgggggacacagtcatccct
taccaacaaggcttcaagatgtacatcaccaccaagctgcctaacccacactactctcca
gaggtggccaccaaagtcaccctcattaacttcaccctgtcaccaagcggtctggaggac
cagctgctgggccaggtggtggctgtggagcgtccagacctggaggaggctaagaaccag
ctgatcatcagcaacgcccagatgaaacaggagctgaaagaaattgaggatgagatcctg
ttccgactcagctccactgagggaaaccccgtggacaacgaggaactcatccaagtgttc
ggagcttccaagatcaaagctggagagatcaaggccaaagtggtggtggcagagcagacg
gagaaggacattgacgccacccgcctggagtacgttccagtggctgtgcgcacacagatc
ctattcttctgtgtatcggacctgtcgaatgtcgaccccatgtaccagtactcactggag
tggttcctctgcatcttcatggctggccttgccaactctgagaaagcagacacggtggag
gagaggattgccaacataaatgagtttttcaccttcagcctgtacagcaatgtgtgccgc
agcttatttgagaagaacaaactcatgtttgcctttctcctgtgcgctcgcatcatgatg
aatgagaacaaaattgatatggctgagtggcgttacctgctgtctggagggatgcccgcc
caggagctgacaaacccagcagtgagttggctgtcggagcgagcctggcaggacattctg
ggcctcagcgctctggacaacttcagaaacctggcagagagcttccccgaacatctgcag
ggtttcaagagcatctttgacagcaaccagcctcacagggaccctctcccaggacagtgg
gacaccgagctggactcgttccagaagctgctggtgctgcgctgtctgagggccgaccgc
cttgttcaaggcctgcaggactttgtctcggctcagctgggacaacgcttcatagagcct
cagacgtcagacctgtcggtggtcttcaaggagtcttccctctccacccccctcatcttt
gtgctctcccctggcacagaccccgctgctgacctctacaaatttgcagatgtcatgcag
ttctccaagaaaatgagtgccatctctctgggccagggccagggcccctgggcagagaag
ctcatgctcgctgctatggagagaggtcattgggtcttctcccagaactgtcacctggcg
cccagctggatgccctccctggagagactcattgaaaacatcagcccagtaaaggtgcac
aaggacttccgtatgtggctcacgagcctttccagcaacaagttcccagtgtctattctc
caaaatgggtcaaagatgaccatcgagcctcccaagggaatcaaggccaatctacagaag
acctacctgaggctcaccaatgagttcttcacctcctccacaaaggcatcacacctcaag
gctttgcttctgtctctgtgtctcttccatggaatttctctggagcgaaggaagtttggc
ccactgggcttcaacattccctacgatttcacagacggagacttaaacatctgcatcagc
caggtcaaaatgttcctggacgagtaccaggacgtcccgtacaaggtgttaaaatatacc
gcaggggagataaattacggcggccgagtgacagatgactgggacagacgatgcctgctg
agcgtcctggaggatttctactgtcctgctgtgctggaagacggtcacttctactcttcg
tctggagtctaccggcagatagacacagatctggatatcaagggttacctggcatacatt
cgtggtttgcccatcaatgatacacctgagatctttggtctccatgacaacgctaatatc
agctttgcccaaaacgagtccttcgccctgctgggagctctggttcgactccagcctcga
gcttcatctgccgggggcaaatctctggaggagatagtggaggagatcgtggcaggcatc
gtggaaaagattcctcggcctttcaacattcaggacgtgatggaaatgttcccggtgctc
tatgaagagtccatgaacacagtgctcatccaggaggtcatcagatacaacaatctgctg
gcggtcatctctcagagtctcggagacatcgtgaaggctctgaaaggtttggtggtgatg
tcgtctgaactggagctcatggccagcagcctgttcatcaacgtggtgcccgatatgtgg
aaagccaaggcctacccgtccctgaagcctctggcatcctgggtgtcagacctgattctg
aggatcaatttcctgcagaaatggatctgtgatggcattccacctgttttctggattagc
ggcttcttcttcccgcaggctttcctcacaggaacgctccagaactacgcccgccgctct
ggcatctccatcgacacaattggatttgactttgaggtcagacagtga
DBGET
integrated database retrieval system
