Trematomus bernacchii (emerald rockcod): 117475405
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Entry
117475405 CDS
T09643
Symbol
iqsec1b
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117475405 (iqsec1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117475405 (iqsec1b)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117475405 (iqsec1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
Shugoshin_N
PH_19
RHG20_PH
Cyclase_polyket
Motif
Other DBs
NCBI-GeneID:
117475405
NCBI-ProteinID:
XP_033977445
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MDGFYEMENPTENPSKAVEYLQELNKIIETQQGLLEKQRVRIDELELHMTDLCKENVSLK
EQHQRHLATCRIQPGNNSSSLGAIKENATMQEKPDTEDLSSAMTHRRDHHYVEGDAPGSE
LGASVDPSSGYGCIPVTHSSHLDSSQIYGHILLPGHLRPRRPKLQHSQSILRKQAEEEAI
KRSRSLSESYELSADLQDKQVEMLERKYGGRFITRHAARTIQTAFRQYQMNKNFERLRSS
MSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSLTDDGTKLGALVQSEHDGEMGV
QAKTPTTQSDFTDAITELEDAFSRQVKSLAESIDDALNCRSLHGDESEPVRVLPDIDREV
GCQMKLSHGASDHRKLDEMRASYSDVTLYIDEEELTPPLPLSQSVDRPSSTESDLRQRSL
NSSQDYWSLAHKDEKGDTDTSCRSTPSLECQEQRLRVDHLPLLTIEPPSDSSVELSDRSD
RSSLKRQSAYERSVTNQQSSPKQITHTRPPRGPSREEEAPRHRPRQLEAHLAINGTANRQ
SKSESDFSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAF
SNDIIRKRHYRIGLNLFNKKPEKGIQYLIDRNFVPDTPVGVAHFLLQRKGLSRQMIGEFL
GNRQKQFNRDVLDCVVDEMDFSSMELDEALRKFQAHIRVQGEAQKVERLIEAYSQRYCIC
NPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPRE
MLVGIYERIRKRELKTNEDHMSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCR
LFEVPDPNKPQKLGVHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLIFEN
QYYPNGVRLTSAIPGADIKVLINFNAPNPQDRKKFTDDLRESISEVQEMEKYRIESELEK
QKGVVRPSMSQTSAMKKDTGNGSLSRGSLDDSYAIGEGLKRSALSSSLRDLSDAGKRGRR
SSAGSLDSNMEGSIISSPHMRRRPPRDGPPRHSGQSLPSSSSLLGTLFGPSRRLKSPSPT
PQALHPTLISHTTHPTNLHHTARAETDPQASVHPHHGQFCHQNPPPYHHHHHYHPPAHLQ
HPPHPFHPATGHGQQPAYPPHPPHPPHPPHPPHPHPHHQTHPPHAPLHHGPQTAPSQAPS
STKPKHSGISTVV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggacggcttttacgagatggagaacccgacggagaaccccagcaaggcggtggagtat
ctacaggagctgaataaaatcatcgagacgcagcaggggcttttggagaagcagagggtc
cggattgacgagctggagctccatatgacggatctgtgtaaggagaacgtgagtctgaag
gagcagcaccagaggcacctggccacctgcagaatacagccggggaacaactcctccagc
ctgggtgccatcaaggagaatgccaccatgcaggaaaaacccgacacagaggacctcagc
tccgccatgactcacagacgagaccatcactatgtggaaggtgatgctccaggcagcgag
ttgggcgcctcagtggaccccagcagtggctatggttgcatcccagtgacccacagcagc
cacctggacagcagccagatatacggacacatcctgctgccgggacacctgaggccccgt
cgacccaaactgcagcattcacagtccatactccgcaagcaggcagaggaagaggccatc
aaacgctcgcgctcgctgtccgagagctatgagctgtcagctgacctgcaggataagcag
gtggagatgctagagaggaaatatggtgggcgtttcataacccggcatgcagcccgcacc
atccagacggctttccgccagtaccagatgaacaagaactttgaacgtcttagaagttct
atgtctgagaaccgtatgtccagacggatcgtcctatcaaatatgagaatgcagttttcc
tttgaaggacctgaaaaagtccacagctcctatttcgaaggaaagcaggtctctctaaca
gacgatggaacaaaacttggtgcgttggtgcagtcagagcacgatggggagatgggtgtt
caggcaaagactccaacaactcagagcgacttcacagacgcgatcacagaactggaagat
gccttctccaggcaggttaaatctctggctgagtccatagacgatgctctgaactgtcgc
agtctgcatggtgacgagtcagagccagtgagagttctcccggatatcgacagggaggtc
ggttgccagatgaaactttctcatggtgcgtcagatcaccgcaaactggatgagatgagg
gcgtcttacagcgacgtcaccctctacatcgatgaagaagaactgacaccgcctcttccc
ttgtctcaatctgtggatcgaccctccagcacagagtcggacttgcgccagcgttccctc
aactcttcccaggactactggtcactggctcataaggatgaaaaaggagatacggacacc
agctgccgaagtacaccgtctctggagtgccaagagcagcgattgagggtagatcacctt
cccttactgaccatcgagcctccaagcgatagttcggtggagctcagcgatcgttctgac
agaagctctttgaagagacagagcgcttacgagcgaagcgtcactaatcagcagagcagc
ccaaaacaaatcacccacactcggccaccaagagggccttcaagggaagaagaagcccct
cgacatcggccacgacaactggaggcccatctggccatcaatggcaccgcaaaccgtcag
agcaagtccgaatccgacttttctgatggtgacaacgacagcatcaacagcacgtccaac
tccaacgacaccatcaactgcagctccgagtcctcgtccagagacagcctgagggagcag
acgctcagcaagcagacgtaccacaaagagactcgcaacagctgggattcaccggcattc
agtaacgacatcatccgaaagagacactaccgcataggcctgaacctcttcaacaagaaa
ccagaaaaaggcatccagtatctgatagatagaaactttgtccccgacacgccggtgggt
gtggctcacttcctgctgcaaaggaaaggcttgagcaggcagatgatcggcgagttcctg
ggtaacagacagaagcagttcaaccgagatgtcctcgactgtgtggtggatgaaatggac
ttctcgagcatggagctggacgaagcgctcaggaaatttcaggcgcacatcagagttcag
ggagaagctcagaaggtggagcggctcatagaggcatacagccaacgttactgcatctgt
aaccctggagtggtgcgacagttcaggaaccccgacaccatcttcatccttgccttcgcc
atcatcctcctcaacaccgacatgtacagccccaacgtgaagcctgagaggaagatgaag
ctggaggactttgtgaaaaaccttcgaggggtggatgatggggaagacatcccccgagag
atgctggtagggatatatgagcggattcgcaagcgagagctcaaaacgaatgaagaccac
atgtcccaggttcagaaagtggaaaaactcattgttgggaagaagccgattggctcgttg
caccacggtctgggctgcgtgctatccttaccacaccggagactggtctgttactgcaga
ctttttgaagtacccgaccctaacaaaccacaaaagttgggtgtccaccaacgggagatc
ttcctcttcaatgacctgctagtggtcactaagattttccaaaagaagaagaactctgtg
acgtacagctttcggcagtccttctcactttatggcatgcaagtgctaatctttgagaat
cagtattatcccaacggagtgcgtctgacgtcagccattcccggagcagacatcaaagtc
ctcatcaacttcaacgcaccaaatcctcaggaccgcaaaaagttcactgacgatctgcga
gaatctatttctgaagtccaagagatggagaagtaccggatagaatctgagctagagaaa
cagaagggggtcgtgaggcccagcatgtcccagacttcagccatgaagaaggacacggga
aacgggtctctgagtcgcgggagcctcgacgacagctacgccattggtgaaggtttgaag
aggagcgcactcagcagctccctacgagacctgtcagacgcaggcaagcgtgggagacgc
agcagtgcaggatcactagacagcaatatggaaggctccatcattagcagcccccacatg
agacgcagacccccgagagacggcccgccccgacacagcggccaatcgctgcccagctcc
tcctccctgctggggactttgtttggccccagcagacgtttgaagtcacccagccccacc
cctcaggctctgcaccccaccctaatctcacacaccacccaccctaccaacttgcaccac
acagcccgggccgaaacggacccccaagcctccgttcaccctcaccacgggcagttttgc
caccagaatcctccgccttaccaccatcatcatcactatcaccctccagcccacctgcag
caccctccacacccgtttcacccggcaacaggtcacgggcagcagccagcataccctcct
caccctcctcaccctcctcaccctcctcatcctcctcatcctcaccctcaccaccaaaca
caccctcctcacgctccacttcaccacggcccccaaacggccccctcccaggcccccagc
agcaccaaacccaagcacagcggcatcagtacggtggtgtaa
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integrated database retrieval system
