Trematomus bernacchii (emerald rockcod): 117475418
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Entry
117475418 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117475418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117475418
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Major cadherins
117475418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
117475418
NCBI-ProteinID:
XP_033977493
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MNVGCVILACTLLVGASSGSKAGPPLKPPCRPGFSQNFYTVIVSRDSLHGQSILKDTTLS
SERVKFEDCQRSREVGFISSDPNFGVRPDGSVYAEQELGNLSEPVEFMVTARALHDPHIW
ETTVKLALAGHPHPLALTKVGIEEMLSRAWDSQPRVIKFTRKHQRSSSVNGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKASGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQATATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVLDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKLIRFEEGVPAGTTLTVFAAQ
DPDHFIHQFVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNVYEATFLAFDNGS
PQASGTGTLQIYLIDVNDNAPVLVPREAQVCERARPNSRVNITASDADADPNVGPFVFEL
PSFPASVRRNWTISRISADYTQLRLRIPYLEAAVYEIPIIVHDSGNPPLSNRSLIRVKVC
PCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERQAKPLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLEHIINKPAGVRRVDERPVIAESQYP
VRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSSGDQ
DYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttggctgcgtcatcctggcgtgcaccttacttgtgggcgcatcctcggggagt
aaggcaggcccgcctctcaaacccccgtgcagaccaggcttctcccagaacttctacaca
gtgatagtctccagagactctctgcacggccagagcatcctcaaagataccaccctgtcc
agtgaacgtgtgaagttcgaggattgccagcgcagcagggaggtgggcttcatcagcagc
gaccccaacttcggcgtgaggcccgatgggtcggtgtacgccgagcaggagctggggaac
ctgtcggagcccgtggagttcatggtgaccgcccgggcgctccatgacccacacatctgg
gagaccaccgtgaagctggccctggctggacatcctcatcctttagccctcaccaaggtt
ggcattgaagaaatgctgtcaagagcctgggactcccaaccccgagttatcaagttcaca
cgaaaacatcagaggagctcctccgtcaatgggctaaggcgacagaagagagactgggtc
atcccgcctatcaatgtgcctgaaaactcccgaggacccttccctcacatgcttgtcaga
atccgctcagatcaggacaaagcttccggcatccgctacagcatcacgggagcaggcgct
gatcagccccccagtgggatctacaacatagaccccatcagcggcaacatgttcgtcacc
caacctctggaccgagaggagagagcgtccttccatctgcgagcccatgcagtggacatg
aatggtaaccaggtggagaacccaatcgatctgtacatctacgtcatcgacatgaacgac
aacagaccagagtttcagaaccaggtgtacaacggctccgtggctgaagggtccaaacca
ggctcgtctgtgatgcaggcgacagccacggattcggacgactcgaccaccgctaacggc
atggtgcgctaccgcatcctctcgcagaccccccacagccccatccccaacatgttcacc
atcaacagtgagactggagacatagtaaccgtggcagccggcctggacagagagaaagtg
tcccagtacaccatcatcgtccaggccactgacatggagggcaacctaaactttgggctg
tcaaacacagccaccgctctcatcagcatcaccgacatcaacgacaaccctccagagctg
acagtcagaacgttttcaggggaggtgccggagaacaaggtgaatgtggtggtgaccaac
ctgacggtgttggacagggatcagccccacagccccaactggaacgctgtgtaccgcatc
gtcagcggagacccctcgggacacttcaccatccgcaccaaccccatcaccaacgagggc
atgctgacggtggtcaagcccgtggactttgagatgaatcgcgccttcatgctgaccgtg
gtggtttccaaccaggcccacctggccagcggcatccagtcctcgctccagtccacagcg
ggggtcaccatctcggtccaggatgtgaacgagcctccagtcttccctgtcaaccccaag
ctgatccgctttgaggagggggtgccggccgggaccactctgaccgtgttcgctgctcag
gaccccgaccacttcatccaccagttcgtcaggtactccaagctgtcagaccctgctaac
tggctgaagatcaacaggaccaacgggcagatcaccaccatggcgctgctcgaccgggag
tccatgtacgtcaaaaacaatgtgtacgaggccacgtttctggcgttcgacaatggctcg
ccccaagccagcgggacaggaactctccagatctacctgatcgatgtgaacgacaacgcc
ccggtgctggtgccccgggaggcgcaggtgtgcgagcgagcgcgccccaactccagggtc
aacatcacggcctcagacgccgacgcagaccccaacgtggggcccttcgtcttcgagctg
ccttcttttcccgccagcgttcgacgcaactggactatctccaggatcagcgctgattac
acccagctgaggctaaggattccttacctggaggcagcggtgtatgagatcccgatcatc
gtgcacgattcggggaaccctcctctgtccaaccgctctctgatcagagtcaaagtttgt
ccctgtgatgataacggggactgcagcgccacgggtgcggtggccgccgccggcctcggc
accggcgccatcatcgccatcctcatctgcatcatcatcctgctcaccatggttctgctg
tttgtggtgtggatgaagcgcagagagaaggagcggcaggcgaagccgctgctgatcgac
cccgaggacgacgtcagggacaacatcctgaagtacgacgaggagggggggggagaggag
gaccaggactacgacctgagccagctgcagcagcccgagtctttagagcacatcatcaac
aagccggcgggggtgcgccgggtggacgagagacccgttatcgctgagtcacagtacccc
gtcagacccagcctgccccaccctggagatatcggagatttcattaacgatggtctgagg
gcagcggacaacgaccccacagcccctccctacgactccctgctggtgttcgactacgag
ggcagcggctccaccgccggctccgtcagctcgctgaactccaccagctcaggggaccag
gactacgactacctcaacgactggggccctcgcttcaagaagctggccgacctctacggg
ggaggggacgacgactga
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