Trematomus bernacchii (emerald rockcod): 117475428
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Entry
117475428 CDS
T09643
Symbol
magi1b
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117475428 (magi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
DUF2464
Motif
Other DBs
NCBI-GeneID:
117475428
NCBI-ProteinID:
XP_033977510
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MSKPVLKKNHWTSRVNECSVSKDARGDLNVPLRGGAENGEFAYIGQVNGDVVLYKMGKLS
EGELLLEVENLSISGLPLYDIQTVIKNCKGAVRLKTVRQGSKLNKDLKHYLSQRFQKSSA
DHELQQTIRDNLYRHAVPCTTRGPRDGEVSGVDYNFLSIEDFLELEKSGTLLEIGTYDGN
YYGTPKPPVQPPGGKVISGSGSGGDAPLPDGLSGSLPGSEHSTPRRSKSYNDMQNAGIGP
GERQQQEDDEDLPDMNSSFTGDSSELDEIPHSVRPYPPPEDPPYVGRTPSPSATTESTQQ
SNSNLSHPPPEDPLGTLPDNWEMAYTENGEVYYIDHNTKTTSWIDPRCMDKPQKPLEECE
DDEGVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPMLEAKRRRQLEQQPQ
QPQPQSQQPPEGERYIREWIEDSALAGAPLANYAANHQETYRDPQTGPPMPNAVGQKRGK
PFFTRNRSELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETG
DVIVSVNDICVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAIL
DNKDPIIVNGQEAHNSYDSPSSHGSQNNNGSTNGGAPHNGLPRPYSPSADVASDTSSHQG
YPNDVVTLASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLKEG
DIIVEVNKRNVQTMSHNQVVDMLSKCPKGSEVSMLVQRGVAPAKKSPKLQLSRKDSQNSS
QHSVSSHRSAHTDSPVHPSLAPTLNESIAPPPPSQPLPGLPPQDSPADGTIQRKPDPFKI
WAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRL
RSGDELVSVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKATYTVKAEGDVPPSPASS
HHSSNQAPSLTEEMGKRDPQGSQNSLNTVSSGSGSTSGIGSGGGGGGGAGGSGNAVIAAA
AATTNSSQPPIVMSNAPSTMQPYDVEIRRGESEGFGFVIVSSVSRPEAGTTFAGNACVAM
PHKIGRIIEGSPADRCGKLKVGDRILAVNSCSITNKSHSDIVNLIKEAGNTVTLRIIPGD
ESSNASLLTNAEKIATITTTHTPQQQAAPEARNNTKPKQESFEFKAPQGPPPQPPTQVSA
QDSEFYSVDLDRDNKGFGFSLRGGREYNMDLYVLRLAEEGAAVRNGKMRVGDEILEINGE
STKGMKHARAIELIKSGGRRVHLVLKRGDGSVPEYVNGPDDVITAYPASGLQNAAEVSAL
TNTPSESSYPPEPPQPSRSKKEPTRPSTGKTHHSKHRHRSPNKKTSKGKTPGKKSKGIKL
VKKKDDKGSDGHRHHSNGKHRSRHRSPDKVHSRSRSAENTLDTRHGGQRSGRSPDRRTGQ
HSNHRSPHRSPHRSPYRSPYRSPHRSPQRSPRQHRSPHRSRHHSPTRRQYHSSDPYRRNA
SPERQRRVNEKPNGVEAVLKEPTRTPELSLPFEDSFLRESPAMDRLNREATRPPLRSQEH
LYGEDSLLRKASSMERIYKGDSLLRDLAASRSQRDATLPRVRTPDSDSAYKRYSSLLRGR
SPERTVRDGRFASRDSTPEPQYRARSLGRDISPEPQYRARSLGRDISPEPQYRARSLGRD
ISPVRSFRRDDSEDEEDDDNFVAAKVREYYSTLKTDSSSSSAIPEPKKTYKDNPKDLSI
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcctgtgctaaagaaaaaccactggacctccagagtgaacgagtgctccgtc
tccaaagatgcccgcggtgacttgaatgtgccactgcgcggcggcgcggagaacggggag
tttgcctacattgggcaagttaacggggatgtcgtgctttacaaaatgggaaaattaagt
gaaggagaactgctgctggaggtggaaaacctatcgatttcgggattacccttgtacgac
atacagacagtgataaagaactgcaaaggggccgtcaggttgaaaactgtcagacaagga
agtaagctgaacaaggacctgaagcattacctgagccagcgcttccagaaatcctcggct
gaccacgaactgcagcagaccattcgagacaacctctaccgccacgctgtgccttgtaca
acccgcggcccacgtgacggagaagtttctggcgtggactacaacttcctctcaatagag
gatttcctggagttggagaagagtgggacccttttggagattggaacgtatgatggtaac
tattatgggacgcccaagccaccggtgcagccccccggtgggaaagtgattagcggtagc
ggtagcggcggtgatgccccactgccagacgggctcagcggtagcctgccgggctctgag
cactccactccccgacgctccaagtcctacaatgacatgcaaaatgctggaatagggcct
ggagagcggcagcagcaggaggacgacgaggacctcccggacatgaacagcagctttaca
ggagattctagtgaattagacgagattcctcactcagtgcgcccctacccccccccggag
gacccgccctacgttgggagaaccccctcaccatcggccaccacggagagcactcagcag
tccaactctaacctgagccatcctcccccggaggaccctctggggactctgcctgacaac
tgggagatggcctacaccgagaacggagaggtctactatatagaccacaatacaaagacc
acctcctggatagaccctcggtgcatggacaagcctcagaaacccctggaagaatgtgaa
gacgatgaaggggtccacacagaggagctggacaacgacttagaacttccaccaggatgg
gagaaaatcgacgatccagtgtatggggtctactatgttgatcatatcaacaggaagacc
cagtatgagaatcccatgttggaggctaagaggcgcaggcagctggagcagcagcctcag
cagcctcagccccaaagccagcagccacctgaaggtgagcgctacatccgagaatggatc
gaggactcggcgttggcaggggccccgctggccaactacgctgccaaccaccaggagacc
tacagggacccccaaacaggaccaccaatgcccaacgccgtgggacaaaagcgagggaag
cctttctttactcggaaccgatccgagctgaatgggactttcatcaacaccaagctgaaa
aagagtcgccgggggttcggcttcaccgtggtcggaggcgacgagccggacgagttcctg
cagatcaagagcctagttttagatggacctgccgccctggatggcaaaatggagacaggc
gatgtgatagtgagtgtcaatgacatctgtgtgctcggctacacccacgcccaagttgtg
aagatcttccagtccatccctatcggctccatggtgaacttggagctgtgccgcggctac
ccgctgccctttgaccccgatgaccccaacactagcctggtcacctccgtggccattctg
gacaacaaagaccccatcatcgtcaacggtcaggaggcccacaacagctacgactcgccg
tccagccacggcagtcagaacaacaacggctcgaccaacggaggggcgcctcacaacggc
ctcccccgaccctacagcccctccgcggacgtggcctccgatacctcttcccatcaaggc
taccccaacgacgtggtcaccctggcctcctccatcgccacgcaaccagagctcatcact
gtacacatggagaaaggagacaagggcttcggcttcaccatcgccgacagtccaggaggc
ggagggcagagggtgaagcagatcgtggattacccgcgctgccgtggcctcaaggagggc
gacatcatcgtggaggtcaacaagagaaacgtgcagaccatgtctcacaaccaggtggtg
gacatgctcagcaagtgtcccaaaggcagcgaggtcagcatgctggtgcagagaggggtg
gcacctgcaaagaagagcccgaaactgcaattgtcgaggaaagacagtcagaacagctcc
cagcacagcgtttccagccaccggagcgcccacacagactcgcctgtgcacccgtccctg
gcgcccactctcaacgagagcatcgcccccccgcccccctctcagcccctgccgggtctg
ccgccccaggactccccggcagacgggaccatccaaagaaaaccggacccctttaagatc
tgggcccagtccaggagcatgtatgaaagtaggcttccagacttccaagagcaggacatt
ttcctgtggaggaaggacacagggttcggcttcaggatcctcggaggcaacgagcccggg
gagccgatctacatcggacacatagtgaaatacggcgcggcagacgaagacgggcgcctg
cggtccggagatgaactggtaagcgtggacggcaccgcagtggtcggcaagtcgcaccaa
ctggtggtgcaactgatgcagcaggcggcaaagcagggccacgtcaacctcaccgtgcga
cgcaaagccacctacaccgttaaagcagaaggagacgtgcccccatcgccggcgtcctcc
caccacagcagcaaccaggcccccagcctgacggaggagatggggaagcgcgacccccag
ggcagccagaactctctgaacaccgtgagctccggcagcggctccacctctggcatcggc
agcgggggaggcggcggcggaggggcgggcggcagcggtaacgccgtcatcgccgcggct
gcagccaccaccaactcctctcagccccccatcgtcatgtccaacgccccctccaccatg
cagccctacgacgtggagatccgccgcggagagagcgaaggattcggtttcgtcatcgtg
tcttctgtgtcgcggcccgaagctggcaccacctttgctggcaatgcatgtgtggccatg
ccccacaaaatagggcgcatcatcgaggggagcccggcggaccgctgcgggaagctgaag
gtcggcgaccgcatcctggccgtgaactcctgctccatcaccaacaagtcccactctgac
atcgtcaacctcatcaaggaggccgggaacaccgtcacactacgcatcatccccggggac
gagtcatcaaatgcgtctttgttgaccaatgcggagaagatcgccactattaccaccact
cacacacctcagcaacaggctgcccctgaggccaggaacaacaccaaaccaaaacaggag
tcgtttgaattcaaagcaccacagggtcctcctccccagccccccacacaagtctcagct
caggattctgagttctactccgtggacctggaccgagacaacaaaggctttggcttcagc
ctgcgggggggcagagaatacaacatggacctgtacgtgctgcggctagctgaggaagga
gcggccgtccgcaatggaaagatgagggtcggcgacgaaatcctggagatcaacggcgag
agcaccaagggcatgaagcacgcgcgagccatcgagctcatcaagagcgggggccggcgc
gtccatctggtgctcaagaggggtgatggctctgtgcccgaatatgtcaacggccccgac
gacgtcatcacagcctacccagcctcagggttacaaaacgctgcggaagtgagtgccctg
accaacacgccatcggagtccagctacccaccagaaccccctcaaccatcccggagcaag
aaggagccgacccgcccctccaccggcaagacccaccattccaaacaccgccaccgctcc
cccaacaagaaaaccagcaagggaaagaccccggggaaaaagtccaagggcatcaagttg
gtaaagaagaaagatgacaagggaagcgacggccaccggcaccattccaacgggaaacac
cgtagccgccaccgctcgcctgacaaggtgcacagccggtcacgcagtgcagagaacacg
ctggacacccgtcatgggggacaacgcagcggccgctcccccgacagacgcaccggtcag
cactccaatcaccgctcgccccaccgctcgccccaccgctctccttaccgctctccatac
cgctcacctcatcgctctccacaacgctcaccccgccaacacaggtctccccaccgctct
cggcaccactcccccaccagacgccaataccattcctcagacccttaccgccgcaacgcc
tccccggagagacagaggcgcgtcaacgagaagcccaacggagtagaggccgtattgaag
gaacctactaggactcctgaactcagcctgccgttcgaggacagcttcctccgtgagtcc
ccagccatggaccgcctgaacagggaggccacgcggccgccgctgcgaagccaggagcac
ctgtatggggaggacagtctgctgaggaaggcctcctccatggagagaatctacaagggg
gacagcctgctgagggacctggccgcatcgcgcagccagagagacgccaccttgcccaga
gtgcgcacccccgactcagattcggcctacaagaggtacagctcgctgctgaggggccgc
tcacctgagaggacggtgagggacgggcgctttgccagccgcgacagcacccccgagccg
cagtacagagcccgcagcctgggacgggacatctcccccgagccgcagtacagagcccgc
agcctgggacgggacatctcccccgagccgcagtacagagcccgcagcctgggacgggac
atctccccggtcaggagcttcaggagggacgactcggaggacgaagaggacgatgacaat
ttcgtagcggctaaggtgagagagtactacagcacgctgaagaccgacagcagcagctca
tccgccatccccgagcccaagaagacctacaaggacaaccccaaagacctgagcatctga
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integrated database retrieval system
