Trematomus bernacchii (emerald rockcod): 117475429
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Entry
117475429 CDS
T09643
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04622
RIG-I-like receptor signaling pathway
tben04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117475429 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117475429 (cyldb)
04625 C-type lectin receptor signaling pathway
117475429 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117475429 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117475429 (cyldb)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117475429 (cyldb)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C67
117475429 (cyldb)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117475429 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117475429
NCBI-ProteinID:
XP_033977512
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTKLTASTSTHRLLQNGLTVYSSGNMEPRAVVKEKFFIVIRGKSRKGFCRGCIGRVETET
QCGELTGLLYCGGSNALNPKSGGTVRKEDTYSLTRHQAQLLLFVSSVSKRLELLCNPQLF
SAICELSQDDLVVVKHKKGHLPGMVKNLMQIGRKEHKDDLHMLGFEVEFVDSDQNLSSKK
PPPLPLFSAADVVQVVPSYSVPLGLHWKDGQSGGLNRKAVTRINSMPNIGSRARQTRENL
TEQSTGQGQSPSASHVPLEVGSLVEVVSNSGVTVYGVIRWLGVPAGKTNEWAGIELDYDV
SGCSDGKYGSQQYFTCKASRALFVPVTKCSPDSRFSCSSSGRGTSKPRDTLLVPLYEDPE
EYAPPIPESEALSLLVGKMKGIQGHINSCYLDVTLISLFSSSVTLDNICQTPADTERPIM
CTFREIINRLRRQGFVPAQSVMNFRQQLGCDTFRTEEKDPEEFITVLFQKVLRMGPLIKL
RSGQDTCQGAYTFQIFLEKGQMGQMPSVQQLLDTSCLSGDLKFEEVPSCLMVQMPRFGNK
YKMFSHIIPSTELDITDLLYNSPRECFLCGHLAEFECLQCLPDRKMQPGRIKPFCSTCNT
QVHSHPSRQAHSPRALPAPAASDTPVHRHTMQLFAVLCIQTSHYVSFLKYGPDPHSWLFF
DCMADRHGDDQHGYNIPEIRACPELGDFLSQPEEDMARSHPSQTPELVRRLLCDSYMFLY
QNPATPLSRSNHEEPFN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagttaacagcttctaccagcacacatcggctgcttcaaaacggtttaacagtt
tattctagtgggaatatggagcccagagctgtagtgaaggagaagtttttcatcgtgata
cgagggaagtcaaggaaaggcttctgccggggatgtatcggtcgtgtggagacggagacg
cagtgtggggagctgacgggactgctgtactgcggggggagcaacgctttgaatcccaag
agtggaggcaccgtgaggaaggaggacacctactctctgacccgccaccaggcccagctg
ctgctcttcgtttcctccgtgagcaaacgcctggagctgctgtgcaacccccagctgttc
tctgctatctgcgagctgtctcaggacgacctggtggtggtgaagcacaagaaaggacac
ctgccgggaatggtgaagaacctgatgcagatcgggaggaaggagcacaaagacgacctg
cacatgctcggcttcgaggtggagtttgtggacagtgatcagaatttgtcctccaagaaa
cccccccctctgcccctgttcagcgcggcggacgttgtgcaggtggtcccgtcgtactcg
gttcccctcggactgcactggaaggacggacaatctgggggtctgaacagaaaagcggtg
acgcgcatcaactccatgccaaatattggatctcgtgcacgacaaacgagggagaacctt
acggagcagagtaccggtcagggccaaagtccaagtgcatctcatgtgcctctggaggtg
gggtccctggtggaggtggtgtccaactcgggggtcacagtgtacggagtcatccggtgg
ttgggggtccctgcagggaagactaatgaatgggctggaatcgaactggattatgatgtg
agcggttgctctgatggaaagtatggaagccagcagtatttcacctgcaaagcgagcagg
gctttgtttgttcccgtcacaaagtgcagccccgacagcaggttcagctgctcctcctca
ggaagggggacctccaaacccagagacacacttctagttcctctgtatgaggaccctgag
gagtatgcccctcctattcctgaatcggaggccttgtctttgttggtggggaaaatgaag
gggattcagggtcacatcaactcctgttaccttgatgtcacactcatcagtttgttcagc
tcctctgtgaccctggataatatctgccagacgcctgctgacacagagcgacccataatg
tgcactttcagagaaatcatcaaccgtttgcgcagacaaggatttgtgccggctcagagt
gtaatgaacttcagacaacaacttggctgtgataccttccgaacagaggagaaagatcca
gaggagttcatcacagtcctctttcagaaagtgcttcgcatgggccctttgatcaagctc
cgatcaggacaggacacatgtcagggggcctacacattccagatctttctagaaaaagga
cagatgggacagatgccctccgtccaacagctgctggacacatcctgcctgtcaggggac
ctcaagtttgaagaggtgccctcctgtctaatggttcagatgcccagatttggaaacaag
tacaagatgttttctcacataattccctccactgagctggacatcacagatctcctttat
aactctccgagggaatgcttcctctgtgggcatctggctgagttcgagtgtcttcagtgt
ctcccagatcgcaaaatgcagccggggagaatcaaaccgttctgctccacctgtaacacg
caggtccacagccacccctctcggcaggcccactcccccagagccctgccggcccccgcg
gcctctgatactccggtccaccgacacaccatgcagctgtttgccgtgctctgcattcaa
accagccactatgtgtccttcctcaaatacggccctgatcctcactcctggctcttcttt
gactgcatggcagacagacatggtgacgatcaacatggctacaacattcctgagatccga
gcttgtccggagctgggtgacttcctgtcccagccggaggaggacatggcccgctcacac
ccctcccagactcctgagctggtgcgcaggctgctgtgtgactcctacatgtttttatac
caaaacccagccacgccactttctaggtcaaaccacgaggagccctttaactga
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integrated database retrieval system
