Trematomus bernacchii (emerald rockcod): 117475495
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Entry
117475495 CDS
T09643
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117475495
04121 Ubiquitin system [BR:
tben04121
]
117475495
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117475495
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117475495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
IMUP
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
117475495
NCBI-ProteinID:
XP_033977614
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MCECSARAKMSEQEQQLVKKKGKTISTIWKYFGFQESDVEQNKVQCRICYQVVLAPHANT
TNLFNHLKYNHKVQYDGAIIQQKADQKDARSTSSTTSSQSSIQDALHRATAYATSSQRHR
DITGAITFHIAKDMCPVSTVSNQGFKQLVNTLDKRYAMPSRYYFSRSALPALYDKCRGEV
ERDVASADYFATTTDLWSSRTMEPYMSLTVHYIDADFNLKTKCLQTAFFPEDHTGQNIAH
GLREAMAAWGLKEDKLVCMTTDNAANIKLAAEVNGWMRLQCFGHRLHLAIENAMKDPRIG
RAMGLCKKLVSSFSYSWKKKSELAVAQQQLNLPEHSLKTECPTRWGSRQAMIDRVLEQQK
AIAQVLSSDRKTRHLSLTWQDVDVLEAINKSLSPLVEFTDALSGEKYVSVSFLKPTLHLF
NNSLLAVQEDDTDLTKSIKKKILDYLNDKYDDAATQELLDMASALDPRFKLKYVSEDNRG
SIEASLTTEMRRVMTLMENAPLETADDTEDAAAAAPKKKKKGLGSFFKATVDQAAEPQPA
LEKDKAIALELQSYLQAVPLDAEEDPLKWWRESRKFYPRLSILARKYLCIPATSSSSERV
FSTGGNIVTCLRSSLKPDHATWIARTVAPVKNGCTMARLLNPTEKELKLHTGSHLGVLHH
VKDCDLLTPAEVFPSQQGATPLPDVAGFPLSAEQRLQLQALMGKHQGVFGSGKGRTGNTG
LIKQMHTDAYRQVIIPRSSVGPTVLRQKNGRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagtgttcagcgcgagcgaagatgtcagaacaagagcagcaactcgttaaaaag
aagggtaaaactatttccactatttggaagtactttggctttcaggagtccgacgtggag
caaaacaaagtacagtgcaggatttgttaccaggttgtgttggcaccacacgctaacaca
accaatctctttaatcatctgaaatacaaccacaaagtgcaatacgacggggcaataata
caacaaaaagcagaccaaaaagatgcccgctcgacttcatccacaacatcatcacagtca
tcgattcaggacgcattgcacagagcaacggcctacgcgacgagctcgcagagacacaga
gatattacaggtgccattacatttcacatcgctaaagatatgtgcccagttagcactgtt
agcaaccagggctttaagcaacttgtcaacacgttggacaagcgttacgcgatgccgtct
cggtattatttcagcaggtctgcgctgcctgcgctatatgacaaatgccgtggggaagtt
gagagagatgtggcttcagctgactactttgccaccacaacggacctatggtctagccgc
accatggagccatacatgagcctcacagttcattatatcgatgccgatttcaatttgaag
acaaagtgtctccaaaccgcatttttccctgaagaccacacggggcaaaacatcgcccat
ggactgagggaagcgatggctgcttgggggttaaaagaggataaactcgtctgtatgact
acggacaatgccgcaaatataaagctggcggctgaggtcaatggatggatgaggctccag
tgtttcgggcatagactccacttggccatagagaatgcaatgaaggatcccaggatcggc
cgtgcaatggggctttgcaagaagctggtcagcagcttctcctacagttggaaaaagaag
agtgaacttgcagtggcacagcagcagctgaatctgcctgaacactccctaaagacagaa
tgtccaaccagatggggatctaggcaggccatgatcgacagggtcctcgagcagcagaag
gccattgcccaggtcctttccagcgaccgaaaaaccagacatctctccctcacgtggcag
gacgttgatgtactggaggcaatcaataagtcgcttagccctctggtggaattcacagac
gcactttctggagagaagtatgtaagtgtgtcttttttgaaaccaaccctgcacctcttc
aacaactcattgctggcagtgcaggaggatgacacagacctcacaaaaagcataaaaaag
aagatactagactatctcaatgataaatatgatgacgcagcgacacaagagctgcttgac
atggcctctgccctggacccgagattcaagctcaaatatgtcagtgaggacaatcgagga
tccattgaagccagtctgacaactgagatgaggagggtgatgacactcatggagaacgcc
cctcttgagacggcagatgacacggaggatgctgctgcagctgcaccaaagaagaaaaag
aagggactggggagcttcttcaaggccaccgtagaccaagctgcagaacctcaacctgct
ctggaaaaggacaaggccatagctcttgagctacagtcctacctccaggcagtgccactg
gatgctgaggaggacccactaaagtggtggagggaatcccggaagttctacccacggctc
tccatcctggcaaggaagtatctgtgcatcccagccacaagttcctcttcagagagggtc
ttcagtacaggtggcaatattgtcacctgcctgcgctcgtctctgaaaccagaccatgct
acctggattgcacgtacagttgcacctgtgaagaatggatgcacgatggcaaggctgctc
aacccgacagagaaagagttaaagctgcacaccggttcccatttaggtgtgttgcaccat
gttaaggactgtgatctactcacccccgctgaggttttcccctctcagcagggggctacc
cctctgccggatgtggctggcttcccgttgtctgctgaacagagactgcagctgcaggcc
ttgatggggaaacaccaaggggtgttcggctctgggaagggcagaacaggaaacaccggt
ctgatcaaacagatgcatacagacgcatacagacaggtgatcattccccggtcaagcgtc
gggcctaccgtacttcgccagaaaaacggaaggagatag
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