KEGG   Trematomus bernacchii (emerald rockcod): 117475510
Entry
117475510         CDS       T09643                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117475510 (ubap2a)
   03400 DNA repair and recombination proteins [BR:tben03400]
    117475510 (ubap2a)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117475510 (ubap2a)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117475510 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N Methyltransf_32
Other DBs
NCBI-GeneID: 117475510
NCBI-ProteinID: XP_033977630
LinkDB
Position
Unknown
AA seq 1257 aa
MMSSLGGEKARGPREKALPAATQTSQPQKQIQATAEQIRLAQVIYDKNDADFEGKVNQLM
EVTGRNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLVKEGPSDSKENKE
NREKKGEREASKGRGAANRKGRGASRSRPVRPEENGVMEVMPVDRGADRGRRARGAGRGS
AGSGGRGRGRGPPGTRFSAQGMGYGDNKTFNPADYTSESGSGGAQGEMWDTAGTNSTDGT
VTWRHTLEDWASEDWSEDVSLSETKVFTASCAPAAENHITPGQSLDLASLLQKPVGGGRE
PPSSSSSQSLVFTNSHHHHHHQPPQQQQQQPPPGRSTTSSTSYAHAALSSVLGAGFGDLG
QAKRPPPSAGAQILEQLKGPGLGPLPSAQAAPPSSTQGSNPSMGRLPGLGAPVPPPSSSS
WDIKASESNSTSLSSQFSREFGLQPEPSLVLSHLVQRHAGPSLPLARQPSPPSQHQAPPA
SASPAPHLTGPLAQAGQAMAAGAKPHAPGAGLDPQGGNTPQQQRAQLKVQKRRIPPSSKI
PATAVEMPGSAEVPGLNLQFGALDFGSESAMPEFGIVDNCVSQSRESTPAPAPSLPAPGP
GIQSQTSLYSKPLSESLGSPLSVALPLPLSSAEPVYHSSVQLPNLTPSSLGSGIPSSSTV
SSASSSIPSSSHYSSVGGGYDGTMPPHSRLAFSQSKEATGPVMNGLNGVRTSAALDTSSA
SSTPKPESPSLNICTNGPSAPSSHLPSSMPPHSSTLSSLAQDMPSASHLNSHNSHVSSHS
SAMGSSALTYTCVDNSGVSSLAPSTGSYSQPSSLHSHNSSISSSSISHLVNMPNMGGSMG
SSVGGIISASGLHSAAMAAASSALGLGSNGANATSNLNAQRNNPLLSSGKAPPNLSQGVP
PLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPAATLSGRDGG
LANNPYSGEVTKFGRNDSTSPAPPASLAAQQPSQGQSQGQNQAQQQQQPPQAQQPQGQPQ
HHSSQQAFLPPGYSYTGLPYYAGMPGAVANAAAFQYGHMFVPPGGPASAKQHSMGLGLGN
PSASPFQQQTQQQPSGYGQHAFSSGYEELTAGPAGVDYSKGYNSSSQAQAKSAASGPGKG
VSVTSSNSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLNPGAAPGGYAP
APFLHILPHQQPHSQLLHHHLAQDGQGVPNQRGQSNSLQQKSQVNKSSYGSSPYWAN
NT seq 3774 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgaaaaggcccggggccctcgggaaaaagcgctgcctgct
gctactcaaacatcacaaccacaaaaacagatacaggctacagctgagcagatccggctc
gcacaggtgatctatgacaagaatgatgctgactttgaaggcaaagttaaccagctgatg
gaggtgactgggaggaaccaggatgagtgcatggtagcgctccacgactgcaacgaggat
gtgagcagagccatcaactttctcctggagagcacctcagacatgacctcatgggagacg
gtagggaagaagaaaccgctggtgaaggagggtccgtcagacagcaaggagaacaaggaa
aacagggagaagaaaggagagagggaggcgagcaagggccgtggggctgccaaccgcaag
ggcaggggggccagccgcagccgaccggtgcgtccagaggagaatggggtaatggaagtg
atgcctgtggacagaggtgcagatcgaggtcgcagggccagaggtgcgggacgaggatct
gcaggatctggaggtcgaggtagaggcagaggaccaccagggacccggttctcggcccaa
ggcatggggtatggtgacaacaagaccttcaacccagcggactacacctcagagtccgga
tcagggggtgcacagggtgagatgtgggacacagcgggcaccaacagcacagatggcaca
gttacctggagacataccttggaggactgggcgtctgaggactggagtgaggatgtcagt
ctatcggagaccaaagtgttcaccgcctcatgtgcacctgctgctgagaaccacatcaca
cctgggcaaagtctggacctcgcctctctgctgcagaagcctgtgggcggaggaagagaa
ccaccttcgtcctcttcctctcagagtctggtcttcaccaactcccaccaccaccaccac
caccagccaccgcaacaacagcagcaacagcccccccccggccgcagcaccaccagcagc
acaagctacgctcatgctgctctgtcgtcagttttgggagctggttttggggacctgggc
caggccaagaggcctccgcccagcgctggagctcagatactggaacagctgaagggtcct
ggcctgggtccactgccctcggcccaggcggcgcctccttccagcacccaagggagcaac
ccctccatgggccgactgccaggcctgggagcacctgtacctccaccctcctcatccagc
tgggacatcaaggcatcagaatccaactccacctcgctgtcctcacagttcagccgtgag
tttggcctgcagcccgagccctctcttgtgctgagtcatctggtccagaggcatgcgggc
ccctccctgcctctggcccgtcagcccagtcctccatcgcaacaccaagcgccccctgct
tccgcctcgcccgccccccacctcaccggccccctggcacaggcaggccaggcgatggct
gctggtgctaaacctcatgcccccggcgcagggctggaccctcagggcggcaacacgcca
cagcagcaacgggcgcagctcaaagtccagaaacgaaggatacctccatcatcaaagatt
cccgccacagcggtagagatgccgggctcggctgaagtcccgggtctgaatctccagttc
ggagcgctggacttcggctcggagtcggcaatgcccgagttcggaatcgtcgacaattgt
gtgagccaatccagggagtccaccccggcccccgccccatctcttcctgcaccgggacca
ggcatccagagccagaccagcttgtactccaaaccgctcagtgagtcgctgggcagcccc
ctctccgtcgccctgcctctgcccctctcctcagcagagccggtgtaccactcctcggtg
cagctgcccaacctcactccctcctcattagggagcggcattccctcctcttcgacagtc
tcctccgcctcctcctccatacccagctcctcccactactcctcagtggggggaggttac
gatgggaccatgccccctcactcacgactggccttttcccagagcaaagaggccacgggg
ccagtcatgaatggtctgaatggtgtaaggacctctgctgctctagacacttcatcagcg
tcctccactccgaagccagagtcgccgtctctgaacatctgcaccaacggaccctcggca
ccttcctcccacctcccctcttccatgcctccacacagctccacgctctccagcctggca
caggacatgccctctgccagccatctcaactcacacaacagccatgtcagcagtcattcc
tcagctatgggctccagcgctctaacttacacctgtgttgacaacagcggtgtgagctct
ctggctccttccacggggtcgtactcgcagccctcgtcgctccactcccacaacagcagc
atcagtagcagcagcatcagccacctggtgaacatgcccaacatgggcggcagcatgggc
agctctgtgggcggcatcatcagcgccagcggactccactctgccgccatggccgccgcc
agctcggcgctcggactcggctccaatggagctaatgccacgtccaacctcaacgcacag
aggaacaaccccctgctctcctctggtaaagctccccctaacttgtcacagggagttccc
cctctactgcccaaccagtatatcatgggccccggggggctgctgccagcatacccacag
atctatggttacgaagacctccatatgctccagtccagactgccaatgccctctttgcag
gattactatggaatcacattcccgggccccgcagcgactctctctggcagagacgggggc
ctagccaacaacccctactcaggtgaagtcacaaagttcggcaggaatgactccacctcc
ccggcaccccccgcaagcctggcagcccagcagccttcccagggccagagccaaggccag
aaccaggcccagcagcagcagcagcccccccaggcccagcagccccagggccagccgcag
caccacagcagccagcaggccttcctgcccccgggctacagctacacaggcctgccttac
tacgcggggatgccgggcgccgtggccaacgctgctgccttccagtacggccacatgttc
gttcctcccgggggtccagcctctgccaagcagcacagcatgggcctgggtctgggaaac
ccctctgccagccccttccagcagcagacgcagcagcagcccagcggctacggacagcac
gccttcagctcagggtatgaggagctgacagcggggccggcaggagtcgactacagtaaa
ggatacaactcctcctcacaggcacaagccaaatctgctgcttctgggcccggcaaaggc
gtctccgttacgtccagtaactcgggtgtgccagacatcagtggaagtgtttacaataag
acgcagtcttttgataagcagggattccatgctgggacccctcctcccttcagtctgcca
tcagcactggggggcccagggcctctgaaccctggagcagctcctggaggctatgcaccg
gctccattcctccacatcctgcctcaccagcaaccacactcacagctgctgcaccaccat
cttgctcaggatggacagggggttcccaaccagcggggccagtccaacagcctgcagcag
aagagccaagtcaacaagtcgagctacggcagctccccctactgggccaactga

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